Detailed information NTG0776777

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: PH604_RS09950
• Genome accession: NZ_CP116342
• Coordinates: 1901420..1904521 (-)
• Length: 1033 a.a.
• NCBI ID: WP_272656664.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain SE690.
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1896420..1909521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PH604_RS09940 (PH604_09915)	yccS	1897507..1899657 (+)	2151	WP_003694501.1	YccS family putative transporter	-
PH604_RS09945 (PH604_09920)	-	1900140..1900424 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
PH604_RS09950 (PH604_09925)	pilC	1901420..1904521 (-)	3102	WP_272656664.1	PilC family type IV pilus tip adhesin	Machinery gene
PH604_RS09955 (PH604_09930)	-	1905209..1905472 (+)	264	WP_017147189.1	hypothetical protein	-
PH604_RS09960 (PH604_09935)	gnd	1905552..1907000 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
PH604_RS09965 (PH604_09940)	waaA	1907063..1908334 (+)	1272	WP_025455875.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
PH604_RS09970 (PH604_09945)	-	1908375..1908824 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 1033 a.a.
• Molecular weight: 112906.38 Da
• Isoelectric Point: 9.8655

>NTDB_id=776777 PH604_RS09950 WP_272656664.1 1901420..1904521(-) (pilC) [Neisseria gonorrhoeae strain SE690.]
MNKTLKRQVFRHTALYAAILMFSHTGGGGAMAQTHKYAIIMNERNQPEVKSNVPSSIKDKDRMREYTYHKGSRGGGSVSF
NNNDELVSQQSGTAVFGTATYLPPYGKVSGFDTDSLKGRANAVDWIRTTRIALAGYSYAGVICRSGTGCPKLVYKTQFTF
DQQGLKKKAGSKLDIYEDKSRENSPIYKLKDHPWLGVSFNLGSENTVKDGRSSNKLVSSFGEDNNNQTIVSTTEDYPISL
GDGRREHTAVAYYLNAKLHLLDKKQIQNITGKTVRLGVLKPSIDVRTRNTGFGFLNFWAKWDIKDNGQIPVKLGLPEVKA
GRCINKPNPNPKSALSPALTAPALWFGPGQDGKAEMYSASVSTYPGSSSSKIFLQNLSRNDDKNKPGRYSLKPLSENEIK
SKEPSFMGRQTIIRLDDGVHLIKLSRSKDEVAAFVNLNGNNTGKNDTFGIVKEANVNLDADEWKKVLLPWTVRGPDNDNK
FKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTMPRKDI
ESKDSTLAKELRTFAEKGYVGDRYGVDGGFVLRQVELRGQKHVFMFGAMGLGGRGAYALDLSKINGNYPAAAPLFDVKNG
DNNGKNRKNRVELGYTVGTPQIGKIRNGKYAAFLASGYAAKDIVSSDNTTALYVYDLNDTLGTPIAKIEVKDGKGGLSSP
TLVDKDLDGTVDIAYAGDRGGNMYRFDLSDNDPNKWTVRTIFQGTKPITSAPAVSRLKDKRVVIFGTGSDLTEDDVLNTD
EQYIYGIFDDDKAANNVNASRSVLGSGLLEQVLKEENKTLFLNKGSDGSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIR
KYKDDGCGADTAILGINTADGGALTPRSARPIVPEANTAVAQYSGHKTTSKGKSIPIGCMEKGGKTVCPNGYVYDKPVNV
RYLDETETDGFSTTADGDAGGSGIDPADRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3102 bp

>NTDB_id=776777 PH604_RS09950 WP_272656664.1 1901420..1904521(-) (pilC) [Neisseria gonorrhoeae strain SE690.]
ATGAATAAAACTTTGAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATATTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGCAAACCCATAAATACGCTATTATCATGAACGAGCGAAACCAGCCCGAGGTAAAGTCGAATGTGC
CATCTTCAATAAAGGACAAAGACAGGATGCGCGAATATACTTATCATAAGGGCTCACGAGGAGGAGGCTCTGTCTCATTC
AACAATAACGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAA
GGTTTCCGGTTTTGATACCGATAGTCTGAAAGGGCGCGCCAATGCCGTTGATTGGATTCGTACCACCCGCATCGCGCTGG
CAGGCTACAGCTACGCCGGTGTCATATGCAGAAGCGGCACAGGCTGTCCCAAACTTGTCTATAAAACCCAATTTACCTTC
GATCAACAAGGGTTGAAAAAAAAGGCAGGCAGCAAGCTGGATATATACGAAGACAAAAGCCGCGAAAATTCGCCCATTTA
CAAATTGAAAGATCATCCATGGTTGGGCGTGTCTTTCAATTTGGGCAGCGAGAATACCGTCAAAGATGGCAGATCATCCA
ACAAATTGGTATCTTCTTTTGGTGAAGACAATAATAATCAAACCATTGTCTCTACGACAGAAGACTACCCTATTTCCCTT
GGCGACGGGCGGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAGCTGCACCTGCTGGATAAAAAACAGATTCA
AAATATCACCGGCAAAACAGTGCGGTTGGGTGTCTTGAAGCCGAGCATCGATGTGCGGACAAGAAATACGGGGTTCGGCT
TTCTAAATTTTTGGGCTAAGTGGGACATTAAAGATAACGGGCAGATTCCGGTCAAGCTCGGTCTGCCGGAAGTCAAGGCC
GGGCGCTGCATCAACAAACCGAACCCCAATCCCAAATCAGCCCTTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGG
ACCCGGGCAAGATGGTAAGGCGGAGATGTATTCCGCTTCGGTTTCCACCTACCCCGGCAGCTCGAGCAGCAAAATTTTCC
TGCAAAACCTTTCCCGCAATGATGACAAAAACAAACCGGGCCGCTATTCCCTCAAACCCTTGAGTGAGAATGAGATTAAA
AGTAAAGAGCCGAGTTTCATGGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGATCAAACTGAGTAGAAG
CAAGGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCGGCATTGTTAAGGAAG
CGAACGTCAATCTTGACGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAA
TTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGACAACAACGGCAATCGCGATTTGGG
CGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCGAACGACGGGATGGTGCATATCTTCA
AAAAAAACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGTACGATGCCGCGCAAGGATATT
GAAAGCAAAGATTCTACACTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGA
CGGCGGCTTTGTCTTGCGCCAAGTCGAACTGCGCGGGCAAAAACACGTGTTTATGTTCGGCGCGATGGGTTTGGGCGGCA
GGGGCGCGTATGCCTTGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCCGCCCCCCTGTTTGATGTCAAAAATGGC
GATAATAACGGCAAAAATCGCAAAAATCGCGTGGAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAATCCGCAA
CGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAGATATTGTCAGCAGCGATAATACAACCGCGCTGTATG
TATATGATTTGAACGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAGGGCGGGCTTTCGTCCCCC
ACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGATCGGGGCGGGAATATGTACCGCTTTGA
TTTGAGCGACAACGACCCGAACAAATGGACTGTACGCACTATTTTCCAAGGCACAAAACCGATTACTTCCGCGCCCGCCG
TTTCCCGACTGAAAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGACCGAAGATGATGTACTGAATACGGAC
GAACAATATATTTACGGCATCTTCGACGACGATAAGGCGGCGAATAATGTAAATGCAAGCCGCAGCGTTTTGGGGAGCGG
GCTGCTCGAGCAAGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGACGGATCGGGCAGTAAGGGGT
GGGTAGTGAAGCTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTAACCATCCGC
AAGTATAAAGACGACGGCTGCGGCGCGGATACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAG
AAGCGCGCGCCCGATTGTGCCGGAAGCCAATACGGCTGTCGCACAATATTCCGGCCATAAGACAACCTCCAAAGGCAAAT
CCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAACCGGTTAATGTG
CGCTACCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGGTATAGACCCCGC
CGACAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGGGTGCGCACCCTGCTGATGAACGATTTGGACAGCT
TGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (506-842)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	74.215	100	0.755