Detailed information NTG0776677

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PJ259_RS10435
• Genome accession: NZ_CP116340
• Coordinates: 2245468..2247708 (-)
• Length: 746 a.a.
• NCBI ID: WP_271655697.1
• Uniprot ID: A0AAX3L420
• Organism: Pseudomonas sp. JBR1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2240468..2252708

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PJ259_RS10400 (PJ259_10400)	murB	2240896..2241918 (-)	1023	WP_271655693.1	UDP-N-acetylmuramate dehydrogenase	-
PJ259_RS10405 (PJ259_10405)	-	2241908..2242375 (-)	468	WP_271655863.1	low molecular weight protein-tyrosine-phosphatase	-
PJ259_RS10410 (PJ259_10410)	kdsB	2242382..2243146 (-)	765	WP_271655694.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PJ259_RS10415 (PJ259_10415)	-	2243143..2243328 (-)	186	WP_059232294.1	Trm112 family protein	-
PJ259_RS10420 (PJ259_10420)	lpxK	2243343..2244350 (-)	1008	WP_271655695.1	tetraacyldisaccharide 4'-kinase	-
PJ259_RS10425 (PJ259_10425)	-	2244347..2244787 (-)	441	WP_271655696.1	biopolymer transporter ExbD	-
PJ259_RS10430 (PJ259_10430)	exbB	2244784..2245419 (-)	636	WP_059315847.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
PJ259_RS10435 (PJ259_10435)	comA	2245468..2247708 (-)	2241	WP_271655697.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PJ259_RS10440 (PJ259_10440)	-	2247820..2249061 (-)	1242	WP_059315849.1	lipoprotein-releasing ABC transporter permease subunit	-
PJ259_RS10445 (PJ259_10445)	lolD	2249069..2249770 (-)	702	WP_026083696.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PJ259_RS10450 (PJ259_10450)	-	2249763..2251013 (-)	1251	WP_271655698.1	lipoprotein-releasing ABC transporter permease subunit	-
PJ259_RS10455 (PJ259_10455)	-	2251121..2251672 (+)	552	WP_059315851.1	PilZ domain-containing protein	-
PJ259_RS10460 (PJ259_10460)	-	2251669..2251959 (+)	291	WP_059315852.1	hypothetical protein	-
PJ259_RS10465 (PJ259_10465)	-	2251975..2252691 (+)	717	WP_059315853.1	glycerophosphodiester phosphodiesterase family protein	-

Sequence

Protein

• Length: 746 a.a.
• Molecular weight: 78904.25 Da
• Isoelectric Point: 9.7779

>NTDB_id=776677 PJ259_RS10435 WP_271655697.1 2245468..2247708(-) (comA) [Pseudomonas sp. JBR1]
MRAALLAFALGVLLLRVFAALPSLPLLAALASVAIVLLGTRFFVLGACGLGLAWALLAAHGALADRLDPALEQRVLWIEG
QVSGLPAVDADSVGFVLSGATSRRDVKLPAHIRLNWHGGPRPLTGERWRLAAELRGPAGLVNALGQDREAWLLAQGIGAT
GSVKAGQRLQSASGLATWRDGIRQYLQTRDPAGQGGLLAALVVGDGSGISDRQWQLFQDTGTVHLMVISGQHIGLIALGV
YAGVVILARRGYWPSRLPWRLSAAVLTVATTLGYGLLAGFEVPVQRACVMVTLGLLWQLGRQQVRLADAVLLALVLVLAA
NPLVSLLPGFWLSFGAVLLLLWSFAGRLGQLPWWVTLGRAQWCMALGLAPLLLALGLPLSLSGPLANAVAVPLMDMAVVP
LALAGTLLSLLWSPLGDPVLLLAGGLLQGLLWLLSGLAHLAAAWQPVLAPAWALWLAGLGALLALLPAGVPLRGFGALLM
LPGLFPLAPVPAEGLARITLLDVGQGLAVLVRTRQHALLYDAGPRQGRYDSGARVVLPNVTAAGIGALDIMLLSHADADH
AGGAPAVARGLPAGRVLSGEAGRLKPELHAQDCADGAHWQWNEVAFTTWWRPDADSNASSCVLSVEARGERLLLTGDIDT
RREGELVASGVPLAAEWLVAPHHGSRSGSSAAFIDAVQPRGVLISRGLNNRYGHPHPQVMQRYRERGVIPYDTAELGALS
WTLGRWEAPHGQRLERHWWRIPPPTP

Nucleotide

• Length: 2241 bp

>NTDB_id=776677 PJ259_RS10435 WP_271655697.1 2245468..2247708(-) (comA) [Pseudomonas sp. JBR1]
ATGCGTGCCGCTCTGCTTGCCTTCGCCTTGGGTGTGCTGCTCCTGCGCGTCTTTGCCGCGCTACCGTCACTGCCCCTGCT
GGCGGCTCTCGCCTCGGTCGCCATCGTGCTGCTGGGCACCCGTTTCTTCGTGCTCGGCGCCTGCGGGCTCGGCCTGGCCT
GGGCGCTGCTCGCTGCGCACGGGGCCCTGGCGGATCGCCTGGATCCGGCGCTGGAGCAGCGGGTATTGTGGATCGAGGGC
CAGGTGAGCGGGCTGCCCGCGGTGGATGCCGACTCGGTGGGCTTCGTGCTCAGTGGCGCGACCAGTCGCCGCGACGTCAA
ACTGCCCGCGCACATCCGCCTGAACTGGCACGGCGGTCCTCGCCCGCTGACCGGCGAGCGCTGGCGCCTGGCGGCGGAGC
TACGCGGACCGGCAGGTCTGGTCAACGCCCTGGGCCAGGACCGCGAGGCCTGGCTGCTGGCCCAGGGCATAGGGGCTACC
GGTAGCGTGAAGGCTGGCCAGCGGCTGCAGTCCGCCAGTGGCCTGGCAACCTGGCGCGATGGTATCCGCCAATACCTGCA
GACCCGGGATCCGGCCGGGCAGGGCGGATTGCTCGCCGCGTTGGTGGTAGGCGACGGCTCGGGGATCAGCGACCGCCAAT
GGCAGCTGTTCCAGGACACCGGCACGGTGCACCTCATGGTGATTTCCGGGCAGCACATCGGCCTGATCGCCCTGGGCGTC
TATGCCGGGGTGGTCATCCTGGCGCGCCGTGGCTACTGGCCGAGTCGACTCCCCTGGCGGCTATCCGCCGCCGTGCTGAC
CGTGGCCACCACGCTGGGTTACGGACTGCTGGCCGGTTTCGAGGTGCCGGTGCAGCGCGCCTGCGTCATGGTTACCCTGG
GCTTGCTTTGGCAGCTGGGGCGCCAGCAGGTCCGGCTGGCTGATGCCGTACTGCTGGCCCTGGTGCTGGTCCTGGCGGCC
AATCCCCTGGTCAGCCTGCTGCCTGGCTTCTGGTTGTCCTTTGGCGCCGTGCTGTTGCTGCTGTGGAGCTTCGCGGGCCG
TCTGGGACAGCTGCCCTGGTGGGTGACCCTGGGGCGGGCCCAGTGGTGCATGGCCCTGGGCCTGGCACCGCTGCTGCTGG
CGCTGGGCCTGCCACTGAGCCTGAGCGGTCCCCTGGCCAACGCCGTCGCCGTGCCGCTGATGGACATGGCGGTCGTGCCG
CTGGCGCTGGCGGGGACGCTGCTGTCCCTGCTGTGGTCGCCGCTGGGCGATCCGGTGCTGCTGCTGGCCGGTGGCTTGCT
GCAGGGACTGCTCTGGCTATTGAGCGGATTGGCGCACCTTGCCGCGGCCTGGCAGCCTGTACTCGCGCCGGCCTGGGCGC
TGTGGCTGGCGGGACTCGGGGCGTTGCTGGCCCTGCTGCCGGCGGGCGTGCCGCTGCGCGGCTTCGGCGCACTGCTGATG
TTGCCCGGGCTGTTTCCTCTGGCGCCCGTACCAGCGGAGGGGCTGGCGCGGATCACCTTGCTGGACGTCGGTCAGGGCCT
GGCCGTGCTGGTGCGTACCCGGCAGCATGCGCTGCTCTACGATGCCGGCCCGCGCCAGGGCCGCTATGACAGCGGCGCTC
GGGTCGTCCTGCCCAACGTGACGGCTGCTGGCATCGGCGCCCTGGATATCATGTTGCTCAGCCATGCCGATGCCGATCAC
GCTGGCGGTGCGCCGGCCGTGGCCCGGGGCCTGCCAGCAGGCCGGGTGCTCAGCGGTGAGGCAGGTAGGCTGAAACCGGA
ATTGCATGCCCAGGACTGCGCAGACGGTGCCCATTGGCAATGGAACGAGGTCGCCTTCACCACCTGGTGGCGTCCTGATG
CGGATTCCAACGCCTCCTCCTGTGTACTCAGCGTCGAAGCCAGGGGCGAGCGCCTGCTGTTGACCGGCGACATCGATACC
CGCCGCGAAGGCGAGCTGGTAGCCAGTGGCGTGCCTTTGGCGGCGGAATGGCTCGTCGCCCCGCACCATGGCAGTCGCAG
CGGTTCCAGCGCCGCCTTCATCGATGCCGTCCAGCCGCGCGGTGTGCTGATCTCCCGCGGGCTGAACAATCGCTATGGCC
ATCCGCATCCGCAGGTGATGCAGCGCTATCGCGAACGTGGCGTGATTCCCTATGACACGGCCGAGCTGGGTGCCCTGAGC
TGGACGCTGGGGCGCTGGGAGGCGCCGCACGGTCAGCGCCTGGAGCGTCACTGGTGGCGGATCCCCCCGCCGACACCCTA
A

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-465)

• Domain of unknown function (DUF4131) (DUF4131) (24-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (502-681)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	54.369	96.649	0.525
comA	Ralstonia pseudosolanacearum GMI1000	34.521	100	0.377