Detailed information    

insolico Bioinformatically predicted

Overview


Name   hns   Type   Regulator
Locus tag   H7R46_RS17265 Genome accession   NZ_AP022302
Coordinates   3633392..3633718 (-) Length   108 a.a.
NCBI ID   WP_000801427.1    Uniprot ID   N9J3X5
Organism   Acinetobacter sp. BEC1-S18-ESBL-01     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 3628392..3638718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7R46_RS17245 (BE1S18E01_33450) - 3628499..3629125 (-) 627 WP_042783292.1 FHA domain-containing protein -
  H7R46_RS17250 (BE1S18E01_33460) gspD 3629166..3631436 (-) 2271 WP_042783293.1 type II secretion system secretin GspD -
  H7R46_RS17255 (BE1S18E01_33470) - 3631478..3632314 (-) 837 WP_032013202.1 type II secretion system protein N -
  H7R46_RS17260 (BE1S18E01_33480) gspN 3632314..3633057 (-) 744 WP_032013203.1 type II secretion system protein N -
  H7R46_RS17265 (BE1S18E01_33490) hns 3633392..3633718 (-) 327 WP_000801427.1 H-NS family nucleoid-associated regulatory protein Regulator
  H7R46_RS17270 (BE1S18E01_33500) - 3633913..3634353 (-) 441 WP_002121251.1 acyl-CoA thioesterase -
  H7R46_RS17275 (BE1S18E01_33510) - 3634361..3635554 (-) 1194 WP_005065771.1 hypothetical protein -
  H7R46_RS17280 (BE1S18E01_33520) - 3635564..3636406 (-) 843 WP_032012557.1 hypothetical protein -
  H7R46_RS17285 (BE1S18E01_33530) - 3636415..3637182 (-) 768 WP_032012556.1 uroporphyrinogen-III synthase -
  H7R46_RS17290 (BE1S18E01_33540) hemC 3637186..3638103 (-) 918 WP_032012555.1 hydroxymethylbilane synthase -

Sequence


Protein


Download         Length: 108 a.a.        Molecular weight: 12462.12 Da        Isoelectric Point: 5.0524

>NTDB_id=77659 H7R46_RS17265 WP_000801427.1 3633392..3633718(-) (hns) [Acinetobacter sp. BEC1-S18-ESBL-01]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=77659 H7R46_RS17265 WP_000801427.1 3633392..3633718(-) (hns) [Acinetobacter sp. BEC1-S18-ESBL-01]
ATGAAACCGGATATCAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGTAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTCAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACAACTCGTAAATCTGTTGAGCCTCGTTACCGCAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGCTGGTTAGTTGCTGAAATTGAAAAAGGCGCAAAACTTGAAGATTTCTT
AATCTAA

Domains


Predicted by InterproScan.

(12-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9J3X5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

100

100

1


Multiple sequence alignment