Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PJW02_RS24320 Genome accession   NZ_CP116313
Coordinates   4707692..4707868 (-) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis strain Lip     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4702692..4712868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJW02_RS24300 (PJW02_24300) - 4703167..4703913 (-) 747 WP_000966128.1 YjbA family protein -
  PJW02_RS24305 (PJW02_24305) - 4704057..4704845 (-) 789 WP_000513275.1 DUF2268 domain-containing protein -
  PJW02_RS24310 (PJW02_24310) fabF 4704952..4706190 (-) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  PJW02_RS24315 (PJW02_24315) fabH 4706222..4707154 (-) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  PJW02_RS24320 (PJW02_24320) comZ 4707692..4707868 (-) 177 WP_001986215.1 ComZ family protein Regulator
  PJW02_RS24325 (PJW02_24325) - 4707923..4708795 (-) 873 WP_000487722.1 NAD-dependent epimerase/dehydratase family protein -
  PJW02_RS24330 (PJW02_24330) - 4708825..4709559 (-) 735 WP_000028691.1 hydrolase -
  PJW02_RS24335 (PJW02_24335) - 4709716..4709898 (+) 183 WP_001211116.1 YjzD family protein -
  PJW02_RS24340 (PJW02_24340) clpC 4709937..4712537 (-) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=776585 PJW02_RS24320 WP_001986215.1 4707692..4707868(-) (comZ) [Bacillus thuringiensis strain Lip]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=776585 PJW02_RS24320 WP_001986215.1 4707692..4707868(-) (comZ) [Bacillus thuringiensis strain Lip]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTACGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586