Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   PJW02_RS24235 Genome accession   NZ_CP116313
Coordinates   4688518..4689201 (-) Length   227 a.a.
NCBI ID   WP_000350716.1    Uniprot ID   A0A9W5VN71
Organism   Bacillus thuringiensis strain Lip     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 4683518..4694201
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJW02_RS24220 (PJW02_24220) pepF 4683698..4685524 (-) 1827 WP_000003348.1 oligoendopeptidase F Regulator
  PJW02_RS24225 (PJW02_24225) - 4685576..4686820 (-) 1245 WP_000628331.1 competence protein CoiA -
  PJW02_RS24230 (PJW02_24230) - 4686901..4688445 (-) 1545 WP_000799197.1 cardiolipin synthase -
  PJW02_RS24235 (PJW02_24235) mecA 4688518..4689201 (-) 684 WP_000350716.1 adaptor protein MecA Regulator
  PJW02_RS24240 (PJW02_24240) - 4689547..4690221 (+) 675 WP_000362615.1 TerC family protein -
  PJW02_RS24245 (PJW02_24245) spx 4690271..4690666 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  PJW02_RS24250 (PJW02_24250) - 4691260..4691463 (+) 204 WP_000559971.1 hypothetical protein -
  PJW02_RS24255 (PJW02_24255) - 4691494..4693140 (-) 1647 WP_000727248.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 27009.07 Da        Isoelectric Point: 3.9986

>NTDB_id=776582 PJW02_RS24235 WP_000350716.1 4688518..4689201(-) (mecA) [Bacillus thuringiensis strain Lip]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=776582 PJW02_RS24235 WP_000350716.1 4688518..4689201(-) (mecA) [Bacillus thuringiensis strain Lip]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAGATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564