Detailed information NTG0776517

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QVM93_RS15910
• Genome accession: NZ_CP128958
• Coordinates: 3365920..3366903 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain TUM2330
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3360920..3371903

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QVM93_RS15895 (QVM93_15895)	dppA	3362220..3363827 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
QVM93_RS15900 (QVM93_15900)	dppB	3363978..3364997 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
QVM93_RS15905 (QVM93_15905)	dppC	3365007..3365909 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
QVM93_RS15910 (QVM93_15910)	amiE	3365920..3366903 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
QVM93_RS15915 (QVM93_15915)	dppF	3366900..3367904 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
QVM93_RS15920 (QVM93_15920)	yhjV	3367934..3369205 (-)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
QVM93_RS15925 (QVM93_15925)	-	3369681..3369788 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QVM93_RS15930 (QVM93_15930)	-	3370165..3370272 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
QVM93_RS15935 (QVM93_15935)	-	3370648..3370755 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=776517 QVM93_RS15910 WP_001196487.1 3365920..3366903(+) (amiE) [Escherichia coli strain TUM2330]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=776517 QVM93_RS15910 WP_001196487.1 3365920..3366903(+) (amiE) [Escherichia coli strain TUM2330]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407