Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | H7R46_RS09630 | Genome accession | NZ_AP022302 |
| Coordinates | 2055299..2055679 (-) | Length | 126 a.a. |
| NCBI ID | WP_005069533.1 | Uniprot ID | A0A022IXP4 |
| Organism | Acinetobacter sp. BEC1-S18-ESBL-01 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2050299..2060679
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R46_RS09600 (BE1S18E01_18620) | tadA | 2050362..2050865 (-) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
| H7R46_RS09605 (BE1S18E01_18630) | - | 2050871..2051995 (-) | 1125 | WP_014206599.1 | enoyl-CoA hydratase/isomerase family protein | - |
| H7R46_RS09610 (BE1S18E01_18640) | ung | 2051992..2052705 (-) | 714 | WP_182924195.1 | uracil-DNA glycosylase | - |
| H7R46_RS09615 (BE1S18E01_18650) | - | 2052759..2053355 (-) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| H7R46_RS09620 (BE1S18E01_18660) | gspK | 2053584..2054543 (-) | 960 | WP_005069529.1 | type II secretion system minor pseudopilin GspK | - |
| H7R46_RS09625 (BE1S18E01_18670) | xcpW | 2054544..2055299 (-) | 756 | WP_005069530.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| H7R46_RS09630 (BE1S18E01_18680) | xcpV | 2055299..2055679 (-) | 381 | WP_005069533.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| H7R46_RS09635 (BE1S18E01_18690) | - | 2055669..2056223 (-) | 555 | WP_005069534.1 | type II secretion system protein | - |
| H7R46_RS09640 (BE1S18E01_18700) | - | 2056230..2056838 (-) | 609 | WP_005069536.1 | TetR/AcrR family transcriptional regulator | - |
| H7R46_RS09645 (BE1S18E01_18710) | - | 2056875..2057648 (-) | 774 | WP_005069538.1 | TatD family hydrolase | - |
| H7R46_RS09650 (BE1S18E01_18720) | - | 2057666..2058007 (-) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| H7R46_RS09655 (BE1S18E01_18730) | - | 2058018..2058998 (-) | 981 | WP_005069541.1 | DNA polymerase III, delta' subunit | - |
| H7R46_RS09660 (BE1S18E01_18740) | kdsB | 2059012..2059773 (-) | 762 | WP_002121419.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13934.09 Da Isoelectric Point: 9.4463
>NTDB_id=77643 H7R46_RS09630 WP_005069533.1 2055299..2055679(-) (xcpV) [Acinetobacter sp. BEC1-S18-ESBL-01]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDVQVSLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDVQVSLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=77643 H7R46_RS09630 WP_005069533.1 2055299..2055679(-) (xcpV) [Acinetobacter sp. BEC1-S18-ESBL-01]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCACAGTTTGTCGCAATGAATGAAGTTG
CTTTAATGGAAATAAATCAGGAATGGCTCGAAGGTACACAAAGCAAGCAAGTGACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCTGCGCAATCTACAATTAGTCCAAATGTTCAAAAAGTAGATGTACAAGTTAGTTTATATGATTCTGATAAGGG
GAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTACCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCACAGTTTGTCGCAATGAATGAAGTTG
CTTTAATGGAAATAAATCAGGAATGGCTCGAAGGTACACAAAGCAAGCAAGTGACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCTGCGCAATCTACAATTAGTCCAAATGTTCAAAAAGTAGATGTACAAGTTAGTTTATATGATTCTGATAAGGG
GAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTACCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
94.444 |
100 |
0.944 |