Detailed information NTG0776312

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QVM95_RS00855
• Genome accession: NZ_CP128947
• Coordinates: 181005..181988 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain TUM2826
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 176005..186988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QVM95_RS00840 (QVM95_00840)	dppA	177149..178756 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
QVM95_RS00845 (QVM95_00845)	dppB	179063..180082 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
QVM95_RS00850 (QVM95_00850)	dppC	180092..180994 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
QVM95_RS00855 (QVM95_00855)	amiE	181005..181988 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
QVM95_RS00860 (QVM95_00860)	dppF	181985..182989 (+)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
QVM95_RS00865 (QVM95_00865)	yhjV	183019..184290 (-)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
QVM95_RS00870 (QVM95_00870)	-	184766..184873 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QVM95_RS00875 (QVM95_00875)	-	185249..185356 (+)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
QVM95_RS00880 (QVM95_00880)	-	185732..185839 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=776312 QVM95_RS00855 WP_001196477.1 181005..181988(+) (amiE) [Escherichia coli strain TUM2826]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=776312 QVM95_RS00855 WP_001196477.1 181005..181988(+) (amiE) [Escherichia coli strain TUM2826]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404