Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | H7R46_RS01660 | Genome accession | NZ_AP022302 |
| Coordinates | 352027..352500 (+) | Length | 157 a.a. |
| NCBI ID | WP_005067119.1 | Uniprot ID | - |
| Organism | Acinetobacter sp. BEC1-S18-ESBL-01 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 347027..357500
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R46_RS01635 (BE1S18E01_03120) | - | 347489..349594 (-) | 2106 | WP_002116807.1 | RelA/SpoT family protein | - |
| H7R46_RS01640 | - | 349610..349765 (-) | 156 | Protein_315 | hypothetical protein | - |
| H7R46_RS01645 (BE1S18E01_03130) | rpoZ | 349804..350082 (-) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| H7R46_RS01650 (BE1S18E01_03140) | gmk | 350155..350784 (-) | 630 | WP_002116973.1 | guanylate kinase | - |
| H7R46_RS01655 (BE1S18E01_03150) | ispH | 350907..351857 (+) | 951 | WP_002116992.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| H7R46_RS01660 (BE1S18E01_03160) | fimU | 352027..352500 (+) | 474 | WP_005067119.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| H7R46_RS01665 (BE1S18E01_03170) | pilV | 352494..353054 (+) | 561 | WP_080631029.1 | type IV pilus modification protein PilV | Machinery gene |
| H7R46_RS01670 (BE1S18E01_03180) | pilW | 353054..354055 (+) | 1002 | WP_005067125.1 | PilW family protein | Machinery gene |
| H7R46_RS01675 (BE1S18E01_03190) | pilX | 354052..354861 (+) | 810 | WP_005067126.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16912.60 Da Isoelectric Point: 7.7942
>NTDB_id=77627 H7R46_RS01660 WP_005067119.1 352027..352500(+) (fimU) [Acinetobacter sp. BEC1-S18-ESBL-01]
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=77627 H7R46_RS01660 WP_005067119.1 352027..352500(+) (fimU) [Acinetobacter sp. BEC1-S18-ESBL-01]
ATGAGGGGAATTATTCCGCAAGATGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAGCCAAGCCATACTTGGTCGACAAGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCGTTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTGATAACCAACATCACCCAAGACACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
ATGAGGGGAATTATTCCGCAAGATGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAGCCAAGCCATACTTGGTCGACAAGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCGTTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTGATAACCAACATCACCCAAGACACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
88.535 |
100 |
0.885 |