Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   PGS39_RS20255 Genome accession   NZ_CP116204
Coordinates   3904584..3905042 (+) Length   152 a.a.
NCBI ID   WP_000804868.1    Uniprot ID   A0A0J1HZV6
Organism   Bacillus paranthracis strain NVH_0075/95     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3899584..3910042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PGS39_RS20240 (PGS39_20240) - 3900257..3900493 (+) 237 WP_000283743.1 hypothetical protein -
  PGS39_RS20245 (PGS39_20245) - 3900653..3902761 (-) 2109 WP_000423557.1 polyphosphate kinase -
  PGS39_RS20250 (PGS39_20250) ppx 3902870..3904405 (-) 1536 WP_000658868.1 exopolyphosphatase -
  PGS39_RS20255 (PGS39_20255) kre 3904584..3905042 (+) 459 WP_000804868.1 YkyB family protein Regulator
  PGS39_RS20260 (PGS39_20260) - 3905074..3905736 (-) 663 WP_000922491.1 YkyA family protein -
  PGS39_RS20265 (PGS39_20265) - 3906386..3907027 (-) 642 WP_000680836.1 diguanylate cyclase domain-containing protein -
  PGS39_RS20270 (PGS39_20270) - 3907192..3907437 (+) 246 Protein_3937 hypothetical protein -
  PGS39_RS20275 (PGS39_20275) - 3907377..3907877 (-) 501 WP_000708168.1 hypothetical protein -
  PGS39_RS20280 (PGS39_20280) - 3908303..3909844 (+) 1542 WP_000445753.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=776152 PGS39_RS20255 WP_000804868.1 3904584..3905042(+) (kre) [Bacillus paranthracis strain NVH_0075/95]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=776152 PGS39_RS20255 WP_000804868.1 3904584..3905042(+) (kre) [Bacillus paranthracis strain NVH_0075/95]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J1HZV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493