Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   MWM06_RS11305 Genome accession   NZ_AP025596
Coordinates   2029441..2030208 (-) Length   255 a.a.
NCBI ID   WP_244346682.1    Uniprot ID   -
Organism   Thermus thermophilus strain SNM1-1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2024441..2035208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MWM06_RS11275 (TthSNM11_22610) - 2024729..2025181 (+) 453 WP_244360756.1 arsenate reductase ArsC -
  MWM06_RS11280 (TthSNM11_22620) ubiE 2025178..2025840 (-) 663 WP_244454987.1 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE -
  MWM06_RS11285 (TthSNM11_22630) - 2025932..2027746 (+) 1815 WP_244340936.1 ABC transporter permease -
  MWM06_RS11290 (TthSNM11_22640) - 2027743..2028666 (+) 924 WP_024119908.1 ABC transporter permease -
  MWM06_RS11295 (TthSNM11_22650) - 2028654..2028911 (-) 258 WP_008633810.1 hypothetical protein -
  MWM06_RS11300 (TthSNM11_22660) - 2028908..2029444 (-) 537 WP_011173882.1 flavin reductase family protein -
  MWM06_RS11305 (TthSNM11_22670) yaaT 2029441..2030208 (-) 768 WP_244346682.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  MWM06_RS11310 (TthSNM11_22680) - 2030205..2031011 (-) 807 WP_244360759.1 DNA polymerase III subunit delta' -
  MWM06_RS11315 (TthSNM11_22690) - 2030978..2031700 (-) 723 WP_011228966.1 metallophosphoesterase family protein -
  MWM06_RS11320 (TthSNM11_22700) - 2031715..2032344 (+) 630 WP_011173885.1 hypothetical protein -
  MWM06_RS11325 (TthSNM11_22710) - 2032355..2032555 (+) 201 WP_011173886.1 hypothetical protein -
  MWM06_RS11330 (TthSNM11_22720) - 2032739..2033956 (+) 1218 WP_244360760.1 S-layer homology domain-containing protein -
  MWM06_RS11335 (TthSNM11_22730) - 2034018..2034878 (-) 861 WP_244360761.1 DUF3187 family protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 28425.97 Da        Isoelectric Point: 9.1250

>NTDB_id=77615 MWM06_RS11305 WP_244346682.1 2029441..2030208(-) (yaaT) [Thermus thermophilus strain SNM1-1]
MTVGVRFRTPVLRYVRFRGEAPPVDAFVVVRTGRGLEVGRVRTPPVDRPASGEVVRLASKEDLDRAARLRARAEEALHFV
RARFREEGVRAKVLGCDFTLDGRHLVIHYSAEERVNLRRFAPELARALGARIEFVAEGPREEAQYLGTLGACGMESCCST
WLQGFAQVSIKLARDQQLPLNPEKISGPCGRLLCCLTYEHPVYQELLKELPKKNARVCTKAGLCGKVQKVNPLKGTVELH
LEDGKTLEVPKEELA

Nucleotide


Download         Length: 768 bp        

>NTDB_id=77615 MWM06_RS11305 WP_244346682.1 2029441..2030208(-) (yaaT) [Thermus thermophilus strain SNM1-1]
ATGACCGTGGGCGTACGCTTCCGCACCCCCGTCCTCCGCTACGTCCGCTTCCGGGGGGAGGCCCCGCCCGTGGACGCCTT
CGTGGTGGTCCGCACCGGGCGGGGGCTGGAGGTGGGCCGGGTCCGCACCCCCCCCGTGGACCGGCCGGCCTCGGGGGAGG
TGGTGCGGCTCGCTTCCAAGGAGGACCTGGACCGGGCCGCGAGGCTTCGCGCCCGGGCGGAGGAGGCCCTCCACTTCGTC
CGGGCCCGGTTCCGGGAGGAGGGGGTGCGGGCCAAGGTCCTGGGGTGCGACTTCACCCTGGACGGCCGCCACCTCGTCAT
CCACTACAGCGCCGAGGAGCGGGTGAACCTGAGGCGCTTTGCCCCCGAGCTCGCCCGCGCCCTGGGGGCCCGGATTGAGT
TCGTGGCCGAAGGCCCCCGGGAGGAGGCCCAGTACCTTGGGACCTTGGGGGCCTGCGGCATGGAGTCCTGCTGCTCCACC
TGGCTCCAGGGCTTCGCCCAGGTGTCCATCAAGCTCGCCCGGGACCAGCAGCTTCCCCTGAACCCGGAGAAGATCTCGGG
CCCCTGTGGGAGGCTTCTCTGCTGCCTCACCTACGAGCACCCCGTCTACCAGGAGCTTCTCAAGGAGCTTCCCAAGAAGA
ACGCCCGGGTCTGCACCAAGGCCGGCCTCTGCGGCAAGGTGCAGAAGGTGAACCCCCTGAAGGGCACGGTGGAGCTCCAC
CTGGAGGACGGGAAGACCTTGGAGGTTCCCAAGGAGGAGCTGGCATGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(53-135)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

35.632

100

0.365

Multiple sequence alignment