Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PGS39_RS06540 Genome accession   NZ_CP116204
Coordinates   1264242..1264418 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus paranthracis strain NVH_0075/95     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1259242..1269418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PGS39_RS06520 (PGS39_06520) clpC 1259575..1262175 (+) 2601 WP_000365370.1 ATP-dependent chaperone ClpB Regulator
  PGS39_RS06525 (PGS39_06525) - 1262213..1262395 (-) 183 WP_001211114.1 YjzD family protein -
  PGS39_RS06530 (PGS39_06530) - 1262552..1263286 (+) 735 WP_000028698.1 hydrolase -
  PGS39_RS06535 (PGS39_06535) - 1263316..1264188 (+) 873 WP_000486161.1 NAD-dependent epimerase/dehydratase family protein -
  PGS39_RS06540 (PGS39_06540) comZ 1264242..1264418 (+) 177 WP_009879752.1 ComZ family protein Regulator
  PGS39_RS06545 (PGS39_06545) fabH 1264997..1265929 (+) 933 WP_001100543.1 beta-ketoacyl-ACP synthase III -
  PGS39_RS06550 (PGS39_06550) fabF 1265961..1267199 (+) 1239 WP_000412651.1 beta-ketoacyl-ACP synthase II -
  PGS39_RS06555 (PGS39_06555) - 1267306..1268094 (+) 789 WP_000513292.1 DUF2268 domain-containing protein -
  PGS39_RS06560 (PGS39_06560) - 1268238..1268984 (+) 747 WP_000966138.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=776137 PGS39_RS06540 WP_009879752.1 1264242..1264418(+) (comZ) [Bacillus paranthracis strain NVH_0075/95]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=776137 PGS39_RS06540 WP_009879752.1 1264242..1264418(+) (comZ) [Bacillus paranthracis strain NVH_0075/95]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586