Detailed information NTG0077560

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QUE19_RS21580
• Genome accession: NZ_AP025551
• Coordinates: 4445963..4446988 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain LR-50
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4440963..4451988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE19_RS21560 (EEGS03_41430)	metJ	4442024..4442341 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QUE19_RS21565 (EEGS03_41440)	yiiX	4442525..4443133 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QUE19_RS21570 (EEGS03_41450)	rpmE	4443194..4443406 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QUE19_RS21575 (EEGS03_41460)	priA	4443609..4445807 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
QUE19_RS21580 (EEGS03_41470)	cytR	4445963..4446988 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QUE19_RS21585 (EEGS03_41480)	ftsN	4447080..4448039 (+)	960	WP_286330854.1	cell division protein FtsN	-
QUE19_RS21590 (EEGS03_41490)	hslV	4448132..4448662 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QUE19_RS21595 (EEGS03_41500)	hslU	4448672..4450003 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QUE19_RS21600 (EEGS03_41510)	menA	4450070..4450996 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QUE19_RS21605 (EEGS03_41520)	rraA	4451089..4451574 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QUE19_RS21610 (EEGS03_41530)	zapB	4451659..4451904 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=77560 QUE19_RS21580 WP_000644904.1 4445963..4446988(+) (cytR) [Escherichia coli strain LR-50]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=77560 QUE19_RS21580 WP_000644904.1 4445963..4446988(+) (cytR) [Escherichia coli strain LR-50]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628