Detailed information NTG0775444

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PGH12_RS13130
• Genome accession: NZ_CP116034
• Coordinates: 2818973..2820082 (-)
• Length: 369 a.a.
• NCBI ID: WP_267596431.1
• Uniprot ID: -
• Organism: Chryseobacterium sp. CY350
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2813973..2825082

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PGH12_RS13110 (PGH12_13110)	-	2815020..2815400 (-)	381	WP_267596435.1	group III truncated hemoglobin	-
PGH12_RS13115 (PGH12_13115)	-	2815631..2816605 (+)	975	WP_267596434.1	ion channel	-
PGH12_RS13120 (PGH12_13120)	-	2816602..2817090 (+)	489	WP_267596433.1	YkgJ family cysteine cluster protein	-
PGH12_RS13125 (PGH12_13125)	gdhA	2817423..2818781 (-)	1359	WP_267596432.1	NADP-specific glutamate dehydrogenase	-
PGH12_RS13130 (PGH12_13130)	dprA	2818973..2820082 (-)	1110	WP_267596431.1	DNA-processing protein DprA	Machinery gene
PGH12_RS13135 (PGH12_13135)	-	2820113..2820886 (-)	774	WP_267596430.1	rhomboid family intramembrane serine protease	-
PGH12_RS13140 (PGH12_13140)	-	2821100..2822032 (+)	933	WP_267596429.1	DUF3078 domain-containing protein	-
PGH12_RS13145 (PGH12_13145)	sufD	2822103..2823410 (-)	1308	WP_267596930.1	Fe-S cluster assembly protein SufD	-
PGH12_RS13150 (PGH12_13150)	sufC	2823525..2824268 (-)	744	WP_267596428.1	Fe-S cluster assembly ATPase SufC	-
PGH12_RS13155 (PGH12_13155)	-	2824383..2824769 (-)	387	WP_267596427.1	GxxExxY protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41295.13 Da
• Isoelectric Point: 7.3047

>NTDB_id=775444 PGH12_RS13130 WP_267596431.1 2818973..2820082(-) (dprA) [Chryseobacterium sp. CY350]
MYSEEHLYSIALRECSFIGDINFFKLVRSFGTAKNVWETAKKELSKTDGIGTKTVSDIGNSEHLKFAEKEIVFCEKNSIT
INLRHQNDLPFLLKECDDAPAILYQKGNLDRNLKSLSLVGTRNITSYGKKFIEDFFEEAKSHNFVSVSGLALGVDKEIHE
HSLKHQIPTIAVLAHGFHTLYPSKNKKLSEKIVEENGALFTEFNSSRKPDRENFIQRNRVVAGISPSTIVVETAFGGGSI
STATFANTYNRDVFALPGKITDKYSQGCNHLIFQNKATAISTIKDLLDLAGFNDPKEKNAELFPQSQITIQLSESQELIF
RKIAENPHITLDDLAEKISLASHKILPIILELELLGKVKSFSGRQFLAI

Nucleotide

• Length: 1110 bp

>NTDB_id=775444 PGH12_RS13130 WP_267596431.1 2818973..2820082(-) (dprA) [Chryseobacterium sp. CY350]
ATGTATTCTGAAGAACATCTTTATTCCATTGCTTTGCGCGAATGCAGCTTTATTGGTGATATTAATTTTTTTAAACTTGT
ACGAAGTTTCGGAACTGCAAAAAATGTTTGGGAAACTGCTAAAAAAGAACTCAGCAAGACCGACGGAATCGGCACTAAAA
CAGTTTCCGACATTGGAAATTCTGAGCATCTTAAATTTGCAGAAAAAGAAATTGTTTTCTGTGAAAAAAATTCGATTACC
ATCAATTTAAGACACCAAAACGATTTACCATTTTTACTAAAGGAATGTGATGATGCACCGGCAATTTTGTATCAGAAAGG
AAATCTGGATCGAAATTTAAAATCTCTGAGTTTAGTCGGGACGAGAAATATAACTTCGTACGGTAAAAAATTCATTGAAG
ATTTTTTTGAAGAGGCAAAGTCTCATAATTTTGTTTCTGTGAGCGGCTTAGCGTTAGGTGTCGATAAAGAGATTCATGAG
CATTCTTTAAAACATCAAATTCCAACTATCGCAGTTTTGGCTCACGGTTTTCACACTTTGTATCCTTCAAAAAACAAAAA
GCTTTCAGAAAAAATCGTCGAAGAAAACGGTGCGTTGTTTACTGAATTTAACTCTTCAAGAAAACCAGACAGAGAAAATT
TTATTCAGAGAAATAGGGTCGTTGCGGGAATTTCACCTTCCACTATTGTTGTTGAAACTGCTTTTGGCGGCGGATCTATC
AGTACTGCAACTTTTGCAAACACCTATAATAGAGATGTTTTTGCCTTGCCCGGAAAGATCACCGACAAGTATAGCCAAGG
TTGCAATCACCTGATTTTTCAAAACAAAGCAACGGCAATCTCCACGATCAAAGATTTACTCGATTTGGCAGGTTTTAATG
ATCCGAAAGAAAAAAATGCAGAGCTTTTTCCGCAAAGCCAAATCACCATTCAATTATCTGAAAGTCAAGAATTAATATTC
CGGAAAATCGCTGAAAATCCTCACATAACGTTAGACGATCTAGCGGAGAAAATCTCTCTTGCCTCACACAAAATTCTACC
CATTATTTTGGAATTAGAACTTTTAGGAAAAGTAAAATCCTTTTCCGGGAGACAATTTTTAGCAATATAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (309-363)

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	54.768	99.458	0.545