Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   PEZ80_RS10065 Genome accession   NZ_CP116026
Coordinates   2108876..2110693 (-) Length   605 a.a.
NCBI ID   WP_271292223.1    Uniprot ID   -
Organism   Enterococcus casseliflavus strain CQFYY22-063     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 2103876..2115693
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PEZ80_RS10040 (PEZ80_10045) - 2104833..2105732 (-) 900 WP_213356643.1 RluA family pseudouridine synthase -
  PEZ80_RS10045 (PEZ80_10050) - 2105737..2106534 (-) 798 WP_026008090.1 NAD kinase -
  PEZ80_RS10050 (PEZ80_10055) - 2106540..2107208 (-) 669 WP_005229708.1 GTP pyrophosphokinase family protein -
  PEZ80_RS10055 (PEZ80_10060) - 2107405..2107980 (+) 576 WP_015509976.1 CYTH domain-containing protein -
  PEZ80_RS10060 (PEZ80_10065) - 2108089..2108745 (+) 657 WP_271292222.1 DsbA family protein -
  PEZ80_RS10065 (PEZ80_10070) pepF 2108876..2110693 (-) 1818 WP_271292223.1 oligoendopeptidase F Regulator
  PEZ80_RS10070 (PEZ80_10075) - 2110762..2111751 (-) 990 WP_213356649.1 competence protein CoiA family protein -
  PEZ80_RS10075 (PEZ80_10080) - 2111852..2112502 (-) 651 WP_005229698.1 adaptor protein MecA -
  PEZ80_RS10080 (PEZ80_10085) spxA 2112655..2113053 (-) 399 WP_003127030.1 transcriptional regulator SpxA -
  PEZ80_RS10085 (PEZ80_10090) - 2113763..2115499 (-) 1737 WP_034858408.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 69197.81 Da        Isoelectric Point: 4.7322

>NTDB_id=775392 PEZ80_RS10065 WP_271292223.1 2108876..2110693(-) (pepF) [Enterococcus casseliflavus strain CQFYY22-063]
MSETKQLPARESIPVEKTWDLTKIYADDAAFDIEFQEIQAQVKEASRYQGTLADGPQAFLSALEFVLAFSRRLEKLYVYS
HLKNDQDTANTTYQGLYAKASNLVAQVSEAVAWFDPELLTMSDETIWGYFDQEPKLAVYRHMIEKTINERPHVLPAEQEA
LLAGAGEIFGAPGNIFSVLNNADLDFPVVEDENGEKVQLSHGVYGELMERTDRSVREAAFKGLYGVYEQFRNTFAQTLST
NIKAHNFKAKARKFDSARQAALSANHIPESVYDTLVDVVNQHLPLLHRYMALRKRLLAVDTLHMYDVYTPILGEAPIRYT
YEEAVEKAKEALKPLGEEYLAVVEEAFSNRWIDVVENKGKRSGAYSSGAYDTLPYILMNWNDRLDQLFTLVHEMGHSVHS
YFTRNNQPYAYGDYSIFLAEIASTTNENILTEYMLQTETDPRVKAYVLNHFLDGFKGTIFRQTQFAEFEHFMHVEDAKGT
PLTSEFLSENYAELNAKYYGPSVEKDPEIRLEWSRIPHFYYNYYVYQYSTGFSAASALAKKILAGEPDALTNYLNYLKAG
RSDYPIEVMKKAGVDMTKADYIEDAMKVFEQRLNELEELVKEIEA

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=775392 PEZ80_RS10065 WP_271292223.1 2108876..2110693(-) (pepF) [Enterococcus casseliflavus strain CQFYY22-063]
ATGTCAGAAACAAAACAATTACCAGCACGTGAATCGATTCCAGTCGAAAAAACGTGGGACTTAACGAAAATCTATGCCGA
TGATGCGGCTTTTGACATAGAATTTCAAGAGATCCAAGCACAAGTCAAAGAAGCAAGTCGTTACCAAGGCACTTTAGCCG
ATGGGCCGCAAGCCTTCTTATCCGCATTAGAATTTGTTTTAGCGTTTTCTCGTCGTTTAGAGAAACTCTATGTATACAGT
CATTTGAAAAACGACCAAGATACTGCCAATACGACGTATCAAGGCTTGTATGCAAAAGCAAGTAACTTGGTTGCGCAAGT
AAGTGAAGCCGTTGCTTGGTTTGATCCTGAGCTATTGACAATGTCTGATGAAACGATTTGGGGCTATTTCGATCAAGAGC
CGAAACTAGCTGTTTATCGTCATATGATCGAAAAAACCATCAACGAGCGTCCACATGTCTTGCCAGCGGAGCAAGAAGCG
TTATTAGCTGGTGCTGGCGAAATTTTTGGGGCACCTGGCAACATTTTTTCTGTTTTAAACAATGCTGATTTGGATTTTCC
AGTAGTTGAAGATGAAAACGGGGAAAAAGTGCAGTTATCTCATGGTGTATACGGTGAGTTGATGGAAAGAACGGATCGGT
CTGTCCGTGAAGCAGCCTTTAAAGGTCTTTATGGTGTCTATGAGCAATTCCGCAATACCTTTGCCCAAACATTAAGCACC
AATATCAAAGCCCATAACTTTAAAGCAAAAGCCCGCAAATTTGATTCGGCACGGCAAGCCGCTTTGAGTGCTAACCACAT
TCCTGAAAGTGTCTACGATACATTAGTGGATGTCGTCAATCAGCACCTGCCATTGTTGCATCGTTACATGGCATTAAGAA
AACGCCTGTTGGCTGTCGATACGTTGCATATGTATGATGTTTATACGCCGATTTTAGGGGAAGCACCCATTCGATATACC
TATGAAGAAGCGGTCGAAAAAGCGAAAGAAGCGTTAAAACCATTAGGTGAAGAATACCTTGCGGTGGTTGAAGAAGCCTT
CAGCAATCGGTGGATCGATGTCGTTGAAAACAAAGGCAAACGCAGTGGCGCGTATTCTTCTGGTGCCTATGATACGCTGC
CATATATCCTGATGAACTGGAATGATCGATTGGATCAACTCTTTACTCTTGTTCATGAAATGGGACACAGTGTGCATAGT
TACTTTACACGTAATAACCAGCCTTATGCCTATGGGGATTATTCGATTTTCTTAGCAGAAATCGCTTCAACCACCAATGA
AAATATTTTGACAGAGTATATGCTGCAGACTGAAACAGATCCACGGGTCAAAGCTTATGTCTTGAATCATTTTCTTGATG
GCTTCAAAGGAACGATTTTCCGTCAAACGCAATTTGCCGAGTTTGAACACTTCATGCACGTGGAAGATGCGAAAGGAACG
CCATTGACCAGTGAGTTCTTAAGCGAGAACTATGCCGAGTTAAATGCAAAATACTACGGACCTTCTGTTGAAAAAGATCC
TGAGATTCGTCTTGAGTGGTCACGCATTCCGCATTTCTATTACAATTACTATGTTTACCAATATTCAACCGGATTTTCGG
CAGCTTCTGCTTTAGCGAAGAAAATCTTAGCAGGTGAACCAGATGCCTTAACCAACTATTTGAACTATTTGAAAGCTGGA
CGCAGTGATTATCCAATCGAAGTCATGAAAAAAGCGGGCGTCGATATGACAAAAGCAGATTATATTGAAGACGCGATGAA
AGTATTTGAGCAACGCTTGAATGAATTGGAAGAACTCGTCAAAGAAATTGAAGCATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(207-587)

Oligopeptidase F (Peptidase_M3_N)

(117-186)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

56.155

98.017

0.55