Detailed information NTG0775210

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: PF986_RS13590
• Genome accession: NZ_CP116013
• Coordinates: 2763588..2764733 (+)
• Length: 381 a.a.
• NCBI ID: WP_079978504.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM124349
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2758588..2769733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PF986_RS13570 (PF986_13570)	fnr	2759062..2759778 (-)	717	WP_017418713.1	fumarate/nitrate reduction transcriptional regulator Fnr	-
PF986_RS13575 (PF986_13575)	narK	2759876..2761066 (-)	1191	WP_017418712.1	nitrate transporter NarK	-
PF986_RS13580 (PF986_13580)	argS	2761201..2762871 (-)	1671	WP_025649385.1	arginine--tRNA ligase	-
PF986_RS13585 (PF986_13585)	-	2762868..2763296 (-)	429	WP_014419128.1	DUF1934 domain-containing protein	-
PF986_RS13590 (PF986_13590)	rapF	2763588..2764733 (+)	1146	WP_079978504.1	Rap family tetratricopeptide repeat protein	Regulator
PF986_RS13595 (PF986_13595)	-	2764717..2764836 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
PF986_RS13600 (PF986_13600)	speB	2764959..2765396 (-)	438	Protein_2689	agmatinase	-
PF986_RS13605 (PF986_13605)	-	2765558..2766982 (-)	1425	WP_260654542.1	hypothetical protein	-
PF986_RS13610 (PF986_13610)	-	2766983..2768323 (-)	1341	WP_129091331.1	MATE family efflux transporter	-
PF986_RS13615 (PF986_13615)	-	2768320..2769375 (-)	1056	WP_129091330.1	SagB/ThcOx family dehydrogenase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45816.31 Da
• Isoelectric Point: 5.0722

>NTDB_id=775210 PF986_RS13590 WP_079978504.1 2763588..2764733(+) (rapF) [Bacillus velezensis strain SRCM124349]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSELLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYFIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=775210 PF986_RS13590 WP_079978504.1 2763588..2764733(+) (rapF) [Bacillus velezensis strain SRCM124349]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGCCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGAGCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTCATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	69.816	100	0.698
rapC	Bacillus subtilis subsp. subtilis str. 168	53.684	99.738	0.535