Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   PF977_RS17900 Genome accession   NZ_CP116012
Coordinates   3385017..3385811 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain SRCM124333     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3380017..3390811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF977_RS17865 (PF977_17865) ephM 3380882..3381742 (-) 861 WP_015715538.1 epoxide hydrolase EphM -
  PF977_RS17870 (PF977_17870) spdL 3381729..3382061 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  PF977_RS17875 (PF977_17875) yfhK 3382146..3382664 (-) 519 WP_015715537.1 SH3 domain-containing protein -
  PF977_RS17880 (PF977_17880) yfhJ 3382809..3383078 (-) 270 WP_003243789.1 YfhJ family protein -
  PF977_RS17885 (PF977_17885) sspK 3383203..3383355 (+) 153 WP_015715536.1 small, acid-soluble spore protein K -
  PF977_RS17890 (PF977_17890) yfhI 3383387..3384580 (-) 1194 WP_015715535.1 MFS transporter -
  PF977_RS17895 (PF977_17895) yfhH 3384701..3385015 (-) 315 WP_003244592.1 YfhH family protein -
  PF977_RS17900 (PF977_17900) recX 3385017..3385811 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  PF977_RS17905 (PF977_17905) yfhF 3385900..3386811 (+) 912 WP_015715534.1 TIGR01777 family oxidoreductase -
  PF977_RS17910 (PF977_17910) yfhE 3386866..3386976 (+) 111 WP_003223230.1 YfhE family protein -
  PF977_RS17915 (PF977_17915) yfhD 3387043..3387234 (+) 192 WP_003233561.1 YfhD family protein -
  PF977_RS17920 (PF977_17920) yfhC 3387273..3387857 (-) 585 WP_003243940.1 nitroreductase family protein -
  PF977_RS17925 (PF977_17925) yfhB 3387945..3388826 (-) 882 WP_015715533.1 PhzF family phenazine biosynthesis isomerase -
  PF977_RS17930 (PF977_17930) sxzA 3388942..3389973 (-) 1032 WP_015715532.1 FecCD family ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=775138 PF977_RS17900 WP_003243354.1 3385017..3385811(-) (recX) [Bacillus subtilis strain SRCM124333]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=775138 PF977_RS17900 WP_003243354.1 3385017..3385811(-) (recX) [Bacillus subtilis strain SRCM124333]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTTCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTATTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1