Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   PF977_RS16255 Genome accession   NZ_CP116012
Coordinates   3080419..3081540 (-) Length   373 a.a.
NCBI ID   WP_010886479.1    Uniprot ID   O31604
Organism   Bacillus subtilis strain SRCM124333     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context

Location: 3075419..3086540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF977_RS16230 (PF977_16230) cwlQ 3075558..3076292 (+) 735 WP_015715668.1 bifunctional muramidase/murein lytic transglycosylase -
  PF977_RS16235 (PF977_16235) bhbI 3076547..3076945 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  PF977_RS16240 (PF977_16240) spxH 3076942..3077841 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  PF977_RS16245 (PF977_16245) - 3078155..3078322 (+) 168 WP_003244944.1 hypothetical protein -
  PF977_RS16250 (PF977_16250) pepF 3078360..3080189 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  PF977_RS16255 (PF977_16255) coiA 3080419..3081540 (-) 1122 WP_010886479.1 competence protein CoiA Machinery gene
  PF977_RS16260 (PF977_16260) - 3081614..3081736 (+) 123 WP_003245684.1 hypothetical protein -
  PF977_RS16265 (PF977_16265) mecA 3081731..3082387 (-) 657 WP_003245194.1 adaptor protein MecA Regulator
  PF977_RS16270 (PF977_16270) - 3082354..3082494 (-) 141 WP_119122854.1 hypothetical protein -
  PF977_RS16275 (PF977_16275) yjbE 3082664..3083320 (+) 657 WP_003232944.1 TerC family protein -
  PF977_RS16280 (PF977_16280) spx 3083363..3083758 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  PF977_RS16285 (PF977_16285) yjbC 3083939..3084517 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  PF977_RS16290 (PF977_16290) yjbB 3084682..3085899 (-) 1218 WP_074794275.1 MFS transporter -

Sequence

Protein


Download         Length: 373 a.a.        Molecular weight: 43689.70 Da        Isoelectric Point: 10.1187

>NTDB_id=775125 PF977_RS16255 WP_010886479.1 3080419..3081540(-) (coiA) [Bacillus subtilis strain SRCM124333]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRSECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=775125 PF977_RS16255 WP_010886479.1 3080419..3081540(-) (coiA) [Bacillus subtilis strain SRCM124333]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCGCCATAGACATCGAGCCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTCCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(12-363)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O31604

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

100

1