Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   PF977_RS14775 Genome accession   NZ_CP116012
Coordinates   2817698..2818282 (-) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain SRCM124333     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2812698..2823282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF977_RS14750 (PF977_14750) mobB 2813094..2813615 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  PF977_RS14755 (PF977_14755) glp 2813576..2814868 (-) 1293 WP_015715810.1 gephyrin-like molybdotransferase Glp -
  PF977_RS14760 (PF977_14760) moeB 2814886..2815905 (-) 1020 WP_015715809.1 molybdopterin-synthase adenylyltransferase MoeB -
  PF977_RS14765 (PF977_14765) mobA 2815956..2816555 (-) 600 WP_015715808.1 molybdenum cofactor guanylyltransferase -
  PF977_RS14770 (PF977_14770) cse15 2816692..2817657 (+) 966 WP_015715807.1 spore protein Cse15 -
  PF977_RS14775 (PF977_14775) rok 2817698..2818282 (-) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  PF977_RS14780 (PF977_14780) ykuV 2818748..2819194 (-) 447 WP_064911521.1 thiol-disulfide oxidoreductase YkuV -
  PF977_RS14785 (PF977_14785) ahpA 2819265..2819807 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  PF977_RS14790 (PF977_14790) mscT 2820044..2820847 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  PF977_RS14795 (PF977_14795) ykuS 2820884..2821129 (-) 246 WP_003232382.1 YkuS family protein -
  PF977_RS14800 (PF977_14800) dapI 2821191..2822315 (-) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  PF977_RS14805 (PF977_14805) dapD 2822385..2823095 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=775120 PF977_RS14775 WP_014113628.1 2817698..2818282(-) (rok) [Bacillus subtilis strain SRCM124333]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=775120 PF977_RS14775 WP_014113628.1 2817698..2818282(-) (rok) [Bacillus subtilis strain SRCM124333]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974