Detailed information NTG0774919

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PE066_RS13520
• Genome accession: NZ_CP116009
• Coordinates: 2842246..2843403 (-)
• Length: 385 a.a.
• NCBI ID: WP_271233057.1
• Uniprot ID: -
• Organism: Ramlibacter tataouinensis strain DMF-7
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2837246..2848403

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PE066_RS13495 (PE066_13495)	-	2837410..2839071 (-)	1662	WP_271233052.1	7TM diverse intracellular signaling domain-containing protein	-
PE066_RS13500 (PE066_13500)	rpoH	2839214..2840149 (-)	936	WP_271233053.1	RNA polymerase sigma factor RpoH	-
PE066_RS13505 (PE066_13505)	-	2840336..2840797 (-)	462	WP_271233054.1	DUF962 domain-containing protein	-
PE066_RS13510 (PE066_13510)	cutA	2840848..2841186 (+)	339	WP_271233055.1	divalent-cation tolerance protein CutA	-
PE066_RS13515 (PE066_13515)	selD	2841183..2842235 (-)	1053	WP_271233056.1	selenide, water dikinase SelD	-
PE066_RS13520 (PE066_13520)	pilA	2842246..2843403 (-)	1158	WP_271233057.1	signal recognition particle-docking protein FtsY	Machinery gene
PE066_RS13525 (PE066_13525)	-	2843433..2844884 (+)	1452	WP_271233058.1	pitrilysin family protein	-
PE066_RS13530 (PE066_13530)	-	2844881..2846242 (+)	1362	WP_271233059.1	pitrilysin family protein	-
PE066_RS13535 (PE066_13535)	rsmD	2846506..2847105 (+)	600	WP_271233060.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PE066_RS13540 (PE066_13540)	coaD	2847142..2847648 (+)	507	WP_271233061.1	pantetheine-phosphate adenylyltransferase	-
PE066_RS13545 (PE066_13545)	-	2847700..2848398 (-)	699	WP_271233062.1	alpha/beta fold hydrolase	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 39721.67 Da
• Isoelectric Point: 6.5129

>NTDB_id=774919 PE066_RS13520 WP_271233057.1 2842246..2843403(-) (pilA) [Ramlibacter tataouinensis strain DMF-7]
MFSFFRRKPAATPAPAAPPPPPAAPAQPVAAPAPSPAAEPLPAPAPAPAPSPAATPAPSAAPAAGGLIGSALVQAMEVPA
PAPVAPERQGWMQRLSAGLRKTGTSISEVFTGGQIDDNLYEELESALLLADTGVKATQHLLDEVKRKVAATGATRPVQVK
NILNEALAQLLKPLEKALVIGEQQPTVIMVAGVNGAGKTTSIGKLTKHLADEGASVLLAAADTFRAAAREQLAVWADRNT
VEIVSQEGGDPAAVSFDAVNAGRARGKDVVIVDTAGRLPTQLHLMEELRKIRRVVQKAQPDAPHEVLLVIDGNTGQNALA
QVKAFDQALGLTGLIVTKLDGTAKGGVLAAIAQEKPVPVYFIGVGEKLQDLETFSAREFAQALLG

Nucleotide

• Length: 1158 bp

>NTDB_id=774919 PE066_RS13520 WP_271233057.1 2842246..2843403(-) (pilA) [Ramlibacter tataouinensis strain DMF-7]
ATGTTCAGTTTCTTTCGCAGAAAACCGGCTGCCACGCCGGCGCCTGCTGCCCCGCCCCCGCCTCCCGCCGCCCCAGCCCA
ACCGGTCGCAGCGCCGGCCCCGTCCCCCGCGGCCGAGCCGTTGCCTGCGCCTGCGCCCGCCCCTGCGCCCTCACCCGCCG
CCACGCCGGCGCCCAGCGCCGCCCCGGCCGCCGGCGGGCTGATCGGCAGCGCGCTGGTGCAGGCGATGGAGGTCCCGGCG
CCCGCACCGGTGGCGCCGGAGCGCCAGGGCTGGATGCAGCGGCTCAGCGCCGGGCTGCGCAAGACCGGCACCAGCATCAG
CGAGGTCTTCACCGGCGGGCAGATCGACGACAACCTCTACGAGGAGCTGGAATCGGCCCTGCTGCTGGCCGACACCGGGG
TCAAGGCAACCCAGCACCTGCTCGACGAGGTCAAGCGCAAGGTGGCCGCCACCGGCGCGACCCGCCCGGTGCAGGTCAAG
AACATCCTGAACGAGGCACTGGCCCAGCTGCTCAAGCCGCTGGAGAAGGCCCTGGTGATCGGCGAGCAGCAGCCCACGGT
GATCATGGTGGCCGGCGTCAATGGCGCGGGCAAGACCACCTCGATCGGCAAGCTGACCAAGCACCTGGCCGACGAAGGCG
CGTCGGTGCTGCTGGCCGCGGCCGACACCTTCCGCGCGGCGGCGCGCGAGCAGCTCGCCGTCTGGGCCGATCGCAACACG
GTGGAGATCGTCAGCCAGGAAGGCGGCGATCCGGCCGCCGTCAGCTTCGATGCCGTGAACGCCGGCCGGGCCCGCGGCAA
GGACGTGGTGATCGTCGATACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAGGAGCTGCGCAAGATCCGGCGCG
TGGTGCAGAAGGCCCAGCCCGATGCGCCGCACGAGGTGCTGCTGGTGATCGACGGCAATACCGGCCAGAACGCGCTGGCC
CAGGTCAAGGCGTTCGACCAGGCGCTCGGCCTGACCGGGCTGATCGTCACCAAGCTCGATGGCACGGCCAAGGGCGGCGT
GCTGGCCGCGATCGCCCAGGAAAAGCCCGTGCCGGTGTATTTCATCGGGGTCGGCGAGAAACTGCAGGACCTGGAAACCT
TCAGCGCCCGCGAGTTCGCGCAGGCGCTGCTGGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (185-385)

• SRP54-type protein, helical bundle domain (SRP54_N) (103-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.645	100	0.545