Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PE066_RS09320 Genome accession   NZ_CP116009
Coordinates   1972098..1972490 (-) Length   130 a.a.
NCBI ID   WP_271236272.1    Uniprot ID   -
Organism   Ramlibacter tataouinensis strain DMF-7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1967098..1977490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PE066_RS09305 (PE066_09305) - 1968855..1971128 (-) 2274 WP_271236269.1 methyl-accepting chemotaxis protein -
  PE066_RS09310 (PE066_09310) - 1971154..1971684 (-) 531 WP_271236270.1 chemotaxis protein CheW -
  PE066_RS09315 (PE066_09315) - 1971704..1972069 (-) 366 WP_271236271.1 response regulator transcription factor -
  PE066_RS09320 (PE066_09320) pilG 1972098..1972490 (-) 393 WP_271236272.1 PleD family two-component system response regulator Regulator
  PE066_RS09325 (PE066_09325) - 1972562..1972714 (-) 153 WP_271236273.1 rubredoxin -
  PE066_RS09330 (PE066_09330) - 1972827..1973759 (+) 933 WP_271236274.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  PE066_RS09335 (PE066_09335) hemL 1973864..1975156 (+) 1293 WP_271236275.1 glutamate-1-semialdehyde 2,1-aminomutase -
  PE066_RS09340 (PE066_09340) purH 1975262..1976857 (-) 1596 WP_271236276.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  PE066_RS09345 (PE066_09345) - 1976904..1977140 (-) 237 WP_271236277.1 Fis family transcriptional regulator -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14433.60 Da        Isoelectric Point: 7.8522

>NTDB_id=774910 PE066_RS09320 WP_271236272.1 1972098..1972490(-) (pilG) [Ramlibacter tataouinensis strain DMF-7]
MSTTGFKVLVIDDSNTIRRSAEIFLKQGGHEVMLAEDGFDALAKVNDYQPHLIFCDILMPRLDGYQTCAIIKRNAKFASV
PVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQTVQQFGAASQQAQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=774910 PE066_RS09320 WP_271236272.1 1972098..1972490(-) (pilG) [Ramlibacter tataouinensis strain DMF-7]
TTGAGCACGACTGGGTTCAAGGTGCTGGTGATCGACGACAGCAACACCATCCGGCGCAGTGCGGAGATCTTCCTGAAGCA
GGGCGGCCACGAGGTCATGCTGGCCGAGGATGGCTTCGATGCCCTGGCCAAGGTCAACGACTACCAGCCGCACCTGATCT
TCTGCGACATCCTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGAAGTTCGCGTCGGTC
CCGGTGGTCATGCTGTCGTCCAAGGACGGCGTGTTCGACAAGGCGCGCGGGCGCATGGTCGGCTCGCAGGACTACCTGAC
CAAGCCCTTCACCAAAGACCAGTTGCTGCAGACCGTGCAGCAGTTCGGCGCCGCATCGCAGCAGGCGCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.12

90

0.523