Detailed information NTG0774867

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PE062_RS19545
• Genome accession: NZ_CP116006
• Coordinates: 4235354..4236424 (-)
• Length: 356 a.a.
• NCBI ID: WP_418910213.1
• Uniprot ID: -
• Organism: Achromobacter mucicolens strain DMF-4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4230354..4241424

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PE062_RS19525 (PE062_19525)	phnC	4230859..4231629 (+)	771	WP_128828945.1	phosphonate ABC transporter ATP-binding protein	-
PE062_RS19530 (PE062_19530)	phnE	4231626..4232513 (+)	888	WP_128828946.1	phosphonate ABC transporter, permease protein PhnE	-
PE062_RS19535 (PE062_19535)	phnE	4232510..4233334 (+)	825	WP_056325416.1	phosphonate ABC transporter, permease protein PhnE	-
PE062_RS19540 (PE062_19540)	-	4233582..4235240 (+)	1659	WP_271263524.1	CYTH and CHAD domain-containing protein	-
PE062_RS19545 (PE062_19545)	pilA	4235354..4236424 (-)	1071	WP_418910213.1	signal recognition particle-docking protein FtsY	Machinery gene
PE062_RS19550 (PE062_19550)	rsmD	4236903..4237508 (+)	606	WP_056325409.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PE062_RS19555 (PE062_19555)	coaD	4237527..4238030 (+)	504	WP_056558877.1	pantetheine-phosphate adenylyltransferase	-
PE062_RS19560 (PE062_19560)	-	4238146..4238397 (+)	252	WP_042795127.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PE062_RS19565 (PE062_19565)	-	4238394..4239617 (+)	1224	WP_062839585.1	benzoate/H(+) symporter BenE family transporter	-
PE062_RS19570 (PE062_19570)	-	4239637..4240023 (-)	387	WP_056325402.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 36859.51 Da
• Isoelectric Point: 8.5379

>NTDB_id=774867 PE062_RS19545 WP_418910213.1 4235354..4236424(-) (pilA) [Achromobacter mucicolens strain DMF-4]
MAPAPAPVVPAPAPVSTPAPASVPAPVSTPAPVAAPAPVVAAVPEPAPAEAPKKASWLSRLKQGLSRTGQSIGGIFVGVK
VDENLFEELESALIMADAGLEATEKLLTALRARVKKERIEDPAKVKTALRQLLADHLRPLERAFDLKRTQPLVVMIAGVN
GAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVSVISQDGGDPAAVAFDSVNAGRARGMGVVMVDT
AGRLPTQLHLMEELKKIRRVIGKADASAPHEVLLVVDGNTGQNALAQIRAFDAAINLTGLVVTKLDGTAKGGTLAAVAAG
SQGVRPVPVYWIGVGESLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1071 bp

>NTDB_id=774867 PE062_RS19545 WP_418910213.1 4235354..4236424(-) (pilA) [Achromobacter mucicolens strain DMF-4]
ATCGCGCCCGCGCCTGCACCCGTGGTCCCGGCGCCTGCGCCGGTATCAACGCCTGCGCCTGCGTCTGTACCCGCGCCAGT
ATCCACGCCTGCGCCTGTCGCAGCACCCGCACCCGTCGTTGCAGCCGTCCCGGAACCCGCACCCGCCGAGGCGCCCAAGA
AAGCCTCCTGGCTGTCGCGCCTGAAGCAAGGTCTGTCGCGCACCGGTCAGAGCATTGGCGGCATCTTCGTCGGCGTGAAG
GTCGACGAGAACCTGTTCGAAGAACTCGAATCGGCCCTCATTATGGCCGATGCGGGCCTTGAGGCCACCGAGAAGCTCCT
GACCGCGCTGCGCGCGCGCGTCAAGAAGGAACGCATCGAGGACCCGGCCAAGGTGAAGACGGCCCTGCGGCAGTTGCTGG
CCGATCATCTGCGCCCGCTGGAGCGCGCGTTTGACCTGAAGCGCACGCAGCCGCTGGTGGTGATGATTGCCGGCGTGAAC
GGCGCGGGCAAGACGACTTCCATCGGCAAGCTGGCGCATACGTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCCGCGGG
CGACACCTTCCGCGCCGCCGCGCGCGAGCAACTGGTGGAATGGGGCAGCCGCAACAACGTCAGCGTGATTTCGCAGGACG
GCGGCGATCCGGCCGCGGTGGCATTCGACTCGGTCAATGCCGGCCGCGCACGCGGCATGGGCGTGGTGATGGTGGATACC
GCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAACTGAAGAAGATCCGCCGCGTCATCGGCAAGGCGGATGCGTC
CGCGCCGCATGAGGTGCTGCTGGTGGTGGATGGCAACACGGGTCAGAATGCGCTGGCGCAGATCCGCGCGTTTGACGCTG
CCATCAACTTGACTGGTCTGGTCGTGACCAAGCTGGATGGCACGGCCAAGGGCGGCACGCTGGCTGCCGTTGCCGCTGGC
AGCCAGGGCGTGCGTCCGGTGCCGGTGTATTGGATTGGCGTGGGCGAAAGCCTGGAGGACCTGCAGCCCTTCGTGGCGGA
CGAGTTCGCGGCAGCATTGCTGGCGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (152-354)

• SRP54-type protein, helical bundle domain (SRP54_N) (70-131)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.563	89.888	0.508