Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   PE051_RS08320 Genome accession   NZ_CP115980
Coordinates   1723496..1724122 (+) Length   208 a.a.
NCBI ID   WP_033145121.1    Uniprot ID   A0A263VSI0
Organism   Enterobacter asburiae strain WUM-UW/843     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1718496..1729122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PE051_RS08300 (PE051_08280) - 1718896..1720656 (-) 1761 WP_039261614.1 Lon protease family protein -
  PE051_RS08305 (PE051_08285) matP 1720843..1721295 (+) 453 WP_039261615.1 macrodomain Ter protein MatP -
  PE051_RS08310 (PE051_08290) ompA 1721359..1722414 (-) 1056 WP_023311028.1 porin OmpA -
  PE051_RS08315 (PE051_08295) sulA 1722769..1723278 (-) 510 WP_033145120.1 SOS-induced cell division inhibitor SulA -
  PE051_RS08320 (PE051_08300) sxy/tfoX 1723496..1724122 (+) 627 WP_033145121.1 TfoX/Sxy family DNA transformation protein Regulator
  PE051_RS08325 (PE051_08305) yccS 1724079..1726241 (-) 2163 WP_033145122.1 YccS family putative transporter -
  PE051_RS08330 (PE051_08310) - 1726261..1726707 (-) 447 WP_023311032.1 YccF domain-containing protein -
  PE051_RS08335 (PE051_08315) helD 1726831..1728885 (+) 2055 WP_334753152.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23876.44 Da        Isoelectric Point: 9.4588

>NTDB_id=774751 PE051_RS08320 WP_033145121.1 1723496..1724122(+) (sxy/tfoX) [Enterobacter asburiae strain WUM-UW/843]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=774751 PE051_RS08320 WP_033145121.1 1723496..1724122(+) (sxy/tfoX) [Enterobacter asburiae strain WUM-UW/843]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGCTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAACGAAACCGACTCAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAAAAC
AAAGCGCTCGGTATTAAGGTTCTCTTCGCGCTGGAAGGGGCTATCGAAGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A263VSI0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567