Detailed information NTG0774593

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PG907_RS02120
• Genome accession: NZ_CP115955
• Coordinates: 455028..456167 (-)
• Length: 379 a.a.
• NCBI ID: WP_193026599.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain RUN2340
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 450028..461167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PG907_RS02095	-	450728..451990 (-)	1263	WP_020749769.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
PG907_RS02100	-	452267..452893 (-)	627	WP_193026601.1	ANTAR domain-containing response regulator	-
PG907_RS02105	-	453041..453742 (+)	702	WP_064050376.1	fumarylacetoacetate hydrolase family protein	-
PG907_RS02110	maiA	453746..454396 (+)	651	WP_193026600.1	maleylacetoacetate isomerase	-
PG907_RS02115	-	454393..455031 (+)	639	WP_020749764.1	LysE/ArgO family amino acid transporter	-
PG907_RS02120	pilA	455028..456167 (-)	1140	WP_193026599.1	signal recognition particle-docking protein FtsY	Machinery gene
PG907_RS02125	-	456228..457739 (+)	1512	WP_197388292.1	M16 family metallopeptidase	-
PG907_RS02130	-	457739..459082 (+)	1344	WP_193026597.1	M16 family metallopeptidase	-
PG907_RS02135	rsmD	459163..459810 (+)	648	WP_275760627.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PG907_RS02140	coaD	460006..460512 (+)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
PG907_RS02145	-	460563..460811 (+)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40171.39 Da
• Isoelectric Point: 5.8101

>NTDB_id=774593 PG907_RS02120 WP_193026599.1 455028..456167(-) (pilA) [Ralstonia pseudosolanacearum strain RUN2340]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DTLGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1140 bp

>NTDB_id=774593 PG907_RS02120 WP_193026599.1 455028..456167(-) (pilA) [Ralstonia pseudosolanacearum strain RUN2340]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCACCCGAAGC
CGCACAGGCTCCTGCCCCGGCCCCAGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCGCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGACGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCACGCAAGGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGT
GAAGGTGGACGAAGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAATACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTG
CTCATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGTTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGTGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATACGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTACCGGTGTATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAGTTCG
CCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (179-379)

• SRP54-type protein, helical bundle domain (SRP54_N) (98-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.923	100	0.57