Detailed information NTG0774536

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PG906_RS02015
• Genome accession: NZ_CP115944
• Coordinates: 420067..421188 (-)
• Length: 373 a.a.
• NCBI ID: WP_197331682.1
• Uniprot ID: G3A476
• Organism: Ralstonia syzygii R24
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 415067..426188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PG906_RS01990	-	415764..417026 (-)	1263	WP_075465415.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
PG906_RS01995	-	417303..417929 (-)	627	WP_197329685.1	ANTAR domain-containing response regulator	-
PG906_RS02000	-	418080..418781 (+)	702	WP_197331684.1	fumarylacetoacetate hydrolase family protein	-
PG906_RS02005	maiA	418785..419435 (+)	651	WP_197331683.1	maleylacetoacetate isomerase	-
PG906_RS02010	-	419432..420070 (+)	639	WP_078222381.1	LysE/ArgO family amino acid transporter	-
PG906_RS02015	pilA	420067..421188 (-)	1122	WP_197331682.1	signal recognition particle-docking protein FtsY	Machinery gene
PG906_RS02020	-	421249..422742 (+)	1494	WP_197331681.1	M16 family metallopeptidase	-
PG906_RS02025	-	422742..424085 (+)	1344	WP_197331680.1	M16 family metallopeptidase	-
PG906_RS02030	rsmD	424125..424772 (+)	648	WP_197331679.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PG906_RS02035	coaD	424968..425474 (+)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
PG906_RS02040	-	425525..425773 (+)	249	WP_078222383.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 39650.85 Da
• Isoelectric Point: 6.1635

>NTDB_id=774536 PG906_RS02015 WP_197331682.1 420067..421188(-) (pilA) [Ralstonia syzygii R24]
MFSFWKKRKAEPQPAAEPVPPAAAPEAVQAPAPVASPAPAPAPVAVPDTPATPAALDMQADDIETVPTPPVVEQARKGWM
SRLRSGLSKTSKGLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLGELRRRVKAQRIETAEGVKTALRDLLIELLH
PLEKTMVLGREQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQESGDPA
AVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDDTLGLT
GLIITKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1122 bp

>NTDB_id=774536 PG906_RS02015 WP_197331682.1 420067..421188(-) (pilA) [Ralstonia syzygii R24]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGTGCCGCCCGCCGCCGCACCTGAAGC
GGTACAGGCCCCGGCCCCGGTTGCCTCCCCCGCACCTGCACCCGCCCCGGTTGCCGTGCCGGATACACCGGCCACGCCGG
CTGCGCTGGACATGCAGGCCGACGATATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCGCGCAAGGGCTGGATG
TCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGGGGCTGACCACGCTGTTCGTCGGCGTGAAGGTGGACGAGGCGCT
GTTCGAGGAGCTGGAAACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAATACCTGCTGGGCGAACTGCGCC
GCCGTGTGAAAGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTCATCGAGCTGCTGCAT
CCGCTGGAAAAGACCATGGTGCTCGGCCGCGAGCAGCCGACGGTGATCATGATCGCGGGCGTCAACGGCGCCGGCAAGAC
CACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTACGGGCAATCCGTGCTGCTGGCAGCGGGCGACACGTTCCGTG
CCGCCGCGCGCGAGCAGTTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAATCGGGCGACCCGGCC
GCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGATATCGTCATGGCCGACACCGCCGGCCGCCTGCC
GACCCAGCTGCACCTGATGGAAGAACTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCGATGGCGACGGCGCCGCACGAGA
CGTTGCTGGTGATCGACGCCAACACCGGCCAGAATGCGCTGGCGCAGGTGAAAGCCTTCGACGATACGCTCGGCCTGACC
GGCCTGATCATCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCGGCAGCGGCCTGTACCGGT
GTATTTCATCGGCGTGGGCGAACAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCGCCGACGCGCTGCTGGGCT
AG

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (173-373)

• SRP54-type protein, helical bundle domain (SRP54_N) (92-153)

3D structure

• AlphaFold DB: G3A476

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.442	100	0.574