Detailed information NTG0774518

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PG904_RS01615
• Genome accession: NZ_CP115941
• Coordinates: 340312..341439 (+)
• Length: 375 a.a.
• NCBI ID: WP_013213631.1
• Uniprot ID: A0A1U9VHA8
• Organism: Ralstonia syzygii strain BDBR229
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 335312..346439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PG904_RS01590	-	335687..335935 (-)	249	WP_078222383.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PG904_RS01595	coaD	335986..336492 (-)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
PG904_RS01600	rsmD	336688..337335 (-)	648	WP_075465409.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PG904_RS01605	-	337415..338758 (-)	1344	WP_013213629.1	M16 family metallopeptidase	-
PG904_RS01610	-	338758..340251 (-)	1494	WP_078222382.1	M16 family metallopeptidase	-
PG904_RS01615	pilA	340312..341439 (+)	1128	WP_013213631.1	signal recognition particle-docking protein FtsY	Machinery gene
PG904_RS01620	-	341436..342074 (-)	639	WP_078222381.1	LysE/ArgO family amino acid transporter	-
PG904_RS01625	maiA	342071..342721 (-)	651	WP_078222380.1	maleylacetoacetate isomerase	-
PG904_RS01630	-	342725..343426 (-)	702	WP_078222379.1	fumarylacetoacetate hydrolase family protein	-
PG904_RS01635	-	343577..344203 (+)	627	WP_013213635.1	ANTAR domain-containing response regulator	-
PG904_RS01640	-	344480..345742 (+)	1263	WP_078222378.1	CmpA/NrtA family ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 39819.04 Da
• Isoelectric Point: 6.1635

>NTDB_id=774518 PG904_RS01615 WP_013213631.1 340312..341439(+) (pilA) [Ralstonia syzygii strain BDBR229]
MFSFWKKRKAEPQPAAEPVPPAAAPEAVQAPAPAPVASPAPAPAPVAVPDTPATPAALDMQADDIETVPTPPVVEQARKG
WMSRLRSGLSKTSKGLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLGELRRRVKAQRIETAEGVKTALRDLLIEL
LHPLEKTMVLGREQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQESGD
PAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDDTLG
LTGLIITKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1128 bp

>NTDB_id=774518 PG904_RS01615 WP_013213631.1 340312..341439(+) (pilA) [Ralstonia syzygii strain BDBR229]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGTGCCGCCCGCCGCCGCACCTGAAGC
GGTACAGGCTCCAGCCCCGGCCCCGGTTGCCTCCCCTGCACCTGCACCCGCCCCGGTTGCCGTGCCGGATACACCGGCCA
CGCCGGCTGCGCTGGACATGCAGGCCGACGATATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCGCGCAAGGGC
TGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGGGCCTGACCACGCTGTTCGTCGGCGTGAAGGTGGACGA
GGCGCTGTTCGAGGAGCTGGAAACCGCGCTGCTGATGGCCGATGCAGGCGTCGATGCCACCGAATACCTGCTGGGCGAAC
TGCGCCGCCGTGTGAAAGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTCATCGAGCTG
CTGCATCCGCTGGAAAAGACCATGGTGCTCGGCCGCGAGCAGCCGACGGTGATCATGATCGCGGGCGTCAACGGCGCCGG
CAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTACGGGCAATCCGTGCTGCTGGCAGCGGGCGACACGT
TCCGTGCTGCCGCGCGCGAGCAGTTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAATCGGGCGAC
CCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGATATCGTCATGGCCGACACCGCCGGCCG
CCTGCCGACCCAGCTGCACCTGATGGAAGAACTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCGATGGCGACGGCGCCGC
ACGAGACGTTGCTGGTGATCGACGCCAACACCGGCCAGAATGCGCTGGCGCAGGTGAAAGCCTTCGACGATACGCTCGGC
CTGACCGGCCTGATCATCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCGGCAGCGGCCTGT
ACCGGTGTATTTCATCGGCGTGGGCGAACAGGTGGAAGACCTGCAGCCGTTCTCCGCACGCGAATTCGCCGACGCGCTAC
TGGGCTAG

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (175-375)

• SRP54-type protein, helical bundle domain (SRP54_N) (94-155)

3D structure

• AlphaFold DB: A0A1U9VHA8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	62.951	81.333	0.512