Detailed information NTG0774448

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: PG915_RS03180
• Genome accession: NZ_CP115920
• Coordinates: 694963..698349 (-)
• Length: 1128 a.a.
• NCBI ID: WP_353497835.1
• Uniprot ID: A0AAU8BIV8
• Organism: Vibrio chaetopteri strain CB1-14
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 689963..703349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PG915_RS03175 (PG915_03170)	acnB	692274..694871 (+)	2598	WP_353497834.1	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	-
PG915_RS03180 (PG915_03175)	chiS	694963..698349 (-)	3387	WP_353497835.1	response regulator	Regulator
PG915_RS03185 (PG915_03180)	rsmC	698573..699595 (-)	1023	WP_353497836.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
PG915_RS03190 (PG915_03185)	-	699662..700735 (-)	1074	WP_418642297.1	AI-2E family transporter	-
PG915_RS03195 (PG915_03190)	hemL	701090..702382 (-)	1293	WP_353497838.1	glutamate-1-semialdehyde 2,1-aminomutase	-
PG915_RS03200 (PG915_03195)	erpA	702700..703041 (+)	342	WP_353497839.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126644.52 Da
• Isoelectric Point: 5.2667

>NTDB_id=774448 PG915_RS03180 WP_353497835.1 694963..698349(-) (chiS) [Vibrio chaetopteri strain CB1-14]
MLKLRRKQKFKRLQNTLMMAFLVLSITPLTIIALFFLNAHSQDLRDQSTSHLVSLRDTKKQQIVDYFNAQESEVMGFVRS
ELAFASGGRFYGLVNAFQSLGDDIEQARQHAQERYILGSGDQVKTTILPDSSSYVGSERYRLLHKRYHRAFMEHLKRSDF
DDIILVDLAGNVTYSVYKFDYFGTNLETGSYSTRVLGETFARLTSEVKLKRKENEEYTPVIVSDFAEYEGKQNAWVGAPI
IQQGYLHSYAMFRLPISGITKLITDGTPQDINVLLVGSDHSAKIIGLSEETIANSDTVISEALSGITDVSRYQSALGEKY
FAAFAPIALNTTHWALVVETPEAIAFASVNQLETLFVVAMLTAIVVVVIASHYLSNFITSPLLKLTWAAERASGGDLDPS
IISLERADEIGRLALSFERMRRSIKDKIELIKSQNQELEQSLAIIKKQNEELQLADKLKDEFLATTSHELRTPLHGMIGI
AEAMISGANGPIGANHKYQLDIIVNSGQRLASLVDDLLDYHKMRYGSLDIERQALSLTSTTQLVIELSNHLLGDKKIRII
NQVLEPLPLISADPQRLEQVLYNLLGNAIKYTNEGKIVLSATAMSDHIRVQVVDTGQGIPAQQLEHIFEPLVQAGHDSGH
YRQGAGLGLSISRQLIELMGGSLYVSSQPHVGTTFSFTLPLATQQEIEAQSQACSVSHFQISESAELALEEEEVLPENPN
GPVLLIADDEPVNLRILESFLRLEGYQVRLAKDGIEALDQIEKEKPELLLLDIMMPGMSGFEVCESVRETYDHAALPIIM
LTALNQPEDRVRGFELGANDYLAKPFSKPELAARIAAHLQASKAEERRAENQNLKYELKQRAMVEASLLETQGRLIEQLD
NAPEAILCIREDLKVQFANQSAGRLFKRSVEQLKRASIEELIAPKFIHLNQEHYFGEIDAFVDDVRQHINADIMMLPEGS
GLKSIYIFEQGMSLDASRVKNLETAIDALSTYAIEGDKAKLKELKELGGEFTRLADKAEGEEKSRPEIMREILVETMTTS
LTYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRLETLPKTPRWRTVLSSVEYILEHCHKQGPERDYIISLRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=774448 PG915_RS03180 WP_353497835.1 694963..698349(-) (chiS) [Vibrio chaetopteri strain CB1-14]
ATGTTAAAGCTGCGTCGCAAACAGAAATTTAAACGATTGCAAAACACCCTGATGATGGCGTTTTTGGTGCTCAGCATCAC
GCCGCTCACTATCATTGCGCTTTTCTTTCTTAATGCACATAGCCAAGATCTTCGCGACCAAAGCACCTCTCACCTTGTTT
CACTGCGAGATACTAAAAAGCAGCAGATCGTCGATTATTTTAATGCTCAAGAGTCCGAAGTCATGGGCTTTGTTCGCTCC
GAGCTTGCTTTTGCCAGTGGCGGCCGTTTCTACGGTCTAGTCAATGCATTCCAAAGCCTCGGCGACGATATTGAGCAAGC
CCGTCAACATGCTCAGGAGCGTTATATTCTTGGCTCCGGCGACCAAGTGAAAACCACCATTCTCCCAGACTCTAGTAGTT
ACGTTGGTAGTGAGCGCTATCGCTTACTACACAAACGTTACCACCGCGCTTTTATGGAACACTTAAAGCGCTCAGATTTC
GATGACATCATCTTGGTCGATTTAGCGGGTAACGTGACTTACTCGGTGTACAAATTCGATTACTTCGGCACTAACCTCGA
AACCGGCAGCTATTCAACTCGTGTCTTAGGTGAGACGTTTGCGCGCCTTACATCGGAAGTGAAACTCAAACGCAAAGAAA
ACGAAGAATACACACCTGTCATCGTCTCAGACTTTGCTGAATATGAAGGTAAGCAGAATGCTTGGGTGGGTGCTCCAATC
ATCCAACAAGGTTACTTGCACAGTTATGCGATGTTCCGACTGCCAATTAGCGGTATCACTAAGCTGATTACCGATGGAAC
ACCGCAAGACATCAACGTACTTTTAGTGGGGAGCGACCACTCAGCGAAAATTATTGGCTTAAGCGAAGAAACTATCGCCA
ATAGTGACACCGTGATCTCCGAAGCCTTATCTGGCATCACCGATGTCAGCCGCTATCAAAGTGCATTAGGTGAAAAATAC
TTTGCCGCATTTGCGCCTATCGCGCTTAACACAACCCATTGGGCACTGGTTGTCGAAACCCCTGAGGCAATTGCGTTTGC
CAGCGTCAATCAGCTAGAGACCTTGTTTGTGGTCGCCATGCTGACTGCGATTGTTGTCGTGGTCATCGCATCACACTACC
TTTCTAACTTCATTACATCACCGCTATTGAAACTTACCTGGGCTGCAGAGCGCGCTTCTGGGGGCGACCTTGACCCTTCG
ATTATTAGTTTGGAACGTGCCGATGAAATTGGCCGTCTTGCACTCAGTTTTGAACGTATGCGCCGCTCAATTAAGGACAA
GATTGAGCTCATTAAAAGCCAAAACCAAGAACTAGAACAAAGCCTTGCGATCATCAAAAAACAAAACGAAGAATTACAGC
TGGCCGATAAGCTCAAAGATGAATTTCTTGCAACCACATCGCATGAGCTGCGTACTCCACTGCATGGCATGATTGGTATT
GCTGAAGCGATGATTTCTGGTGCCAATGGCCCCATTGGCGCCAATCACAAGTACCAGTTGGATATCATCGTCAACAGTGG
CCAACGTCTTGCGAGCTTGGTTGATGATCTGCTCGATTACCACAAAATGCGCTACGGTAGCCTTGATATCGAACGTCAAG
CTCTGAGCCTAACCAGCACGACTCAACTGGTGATTGAGCTCTCTAACCACTTACTTGGCGACAAAAAGATCCGCATTATC
AACCAAGTCCTTGAACCGCTGCCGTTGATTTCAGCCGACCCGCAGCGCCTTGAGCAAGTGCTTTACAACTTACTTGGTAA
CGCGATTAAGTACACCAACGAAGGTAAAATTGTCCTTTCCGCGACTGCTATGAGTGACCATATTCGCGTTCAGGTAGTCG
ACACCGGCCAAGGTATCCCAGCTCAGCAGCTTGAACACATTTTTGAGCCTTTAGTACAGGCAGGCCACGACTCCGGTCAT
TACCGCCAAGGTGCCGGGCTGGGTCTTTCCATTAGCCGTCAGCTTATCGAGCTCATGGGTGGCTCGCTGTACGTAAGCAG
TCAGCCACATGTCGGCACAACGTTCAGCTTTACGCTGCCTCTAGCTACCCAACAAGAAATTGAAGCGCAATCACAAGCTT
GCTCTGTGAGTCATTTTCAAATTTCTGAATCCGCAGAGCTCGCTCTGGAAGAAGAGGAAGTACTACCTGAAAACCCTAAT
GGCCCAGTATTGCTCATTGCTGACGATGAGCCGGTGAACCTGCGCATTCTCGAAAGCTTCCTGCGACTAGAAGGCTATCA
AGTACGCCTGGCCAAAGACGGTATTGAAGCGCTGGATCAGATTGAGAAAGAAAAGCCAGAACTGCTACTACTCGACATTA
TGATGCCAGGCATGAGCGGCTTTGAAGTGTGTGAGTCGGTACGTGAAACTTACGACCACGCAGCACTGCCTATCATCATG
CTTACCGCTCTTAACCAACCAGAAGACCGAGTACGCGGCTTTGAGCTGGGTGCTAATGACTACTTGGCGAAACCGTTTAG
TAAGCCGGAACTCGCTGCTCGTATTGCAGCTCACTTGCAGGCAAGCAAAGCCGAAGAGCGCCGCGCGGAAAACCAAAACC
TGAAATACGAGCTCAAACAGCGAGCCATGGTCGAAGCTAGCTTACTTGAAACCCAAGGACGTTTGATTGAACAACTCGAC
AATGCTCCTGAAGCCATTTTGTGTATCCGAGAAGATCTTAAGGTTCAGTTTGCTAACCAAAGTGCCGGACGCCTGTTTAA
GCGCTCTGTTGAGCAGCTCAAGCGTGCCAGCATTGAAGAGTTAATCGCGCCGAAATTCATTCACCTAAACCAGGAGCATT
ACTTTGGTGAAATTGATGCCTTCGTCGATGATGTTCGTCAGCACATTAATGCCGACATCATGATGCTTCCTGAAGGTTCT
GGACTGAAGAGTATTTATATCTTTGAGCAAGGAATGTCGCTCGATGCTAGCCGAGTGAAGAACCTCGAAACGGCCATCGA
TGCCCTATCTACTTATGCTATTGAAGGTGATAAAGCCAAGCTTAAAGAACTCAAAGAGCTCGGTGGTGAGTTCACTCGCT
TAGCTGATAAAGCGGAAGGTGAAGAAAAATCGCGTCCGGAAATTATGCGCGAGATCCTCGTCGAAACCATGACCACATCA
CTAACCTACTGGGAGAGTGTCACAGGCCAAAGCAAGTTTGCCTTCGCTGAGCAAAGTGGGCTGTGGCGCGTCTACTTAGA
CCGCAGCACGCTTCAAACCCGAACATTAGATAAGTACCTGCGCCTTGAAACGCTGCCGAAAACGCCACGATGGCGCACTG
TCCTAAGCTCTGTGGAATACATTCTAGAGCACTGCCATAAGCAAGGACCAGAGCGCGACTACATCATTAGTTTACGCGAT
AAACTTCAGCGCCTTCTCACCAGCTAG

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (374-425)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-682)

• Response regulator receiver domain (Response_reg) (725-835)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	70.859	100	0.709