Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | QTN46_RS08445 | Genome accession | NZ_CP128501 |
| Coordinates | 1577313..1577675 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain SRCM123386 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1572313..1582675
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QTN46_RS08415 (QTN46_08415) | flgD | 1573230..1573661 (+) | 432 | WP_013352262.1 | flagellar hook assembly protein FlgD | - |
| QTN46_RS08420 (QTN46_08420) | flgG | 1573686..1574462 (+) | 777 | WP_013352263.1 | flagellar basal body rod protein FlgG | - |
| QTN46_RS08425 (QTN46_08425) | - | 1574502..1574717 (+) | 216 | WP_013352264.1 | flagellar FlbD family protein | - |
| QTN46_RS08430 (QTN46_08430) | fliL | 1574714..1575132 (+) | 419 | Protein_1638 | flagellar basal body-associated protein FliL | - |
| QTN46_RS08435 (QTN46_08435) | fliM | 1575166..1576163 (+) | 998 | Protein_1639 | flagellar motor switch protein FliM | - |
| QTN46_RS08440 (QTN46_08440) | fliY | 1576153..1577286 (+) | 1134 | WP_013352267.1 | flagellar motor switch phosphatase FliY | - |
| QTN46_RS08445 (QTN46_08445) | pilH | 1577313..1577675 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| QTN46_RS08450 (QTN46_08450) | fliZ | 1577690..1578343 (+) | 654 | WP_013352268.1 | flagella biosynthesis regulatory protein FliZ | - |
| QTN46_RS08455 (QTN46_08455) | fliP | 1578336..1579001 (+) | 666 | WP_013352269.1 | flagellar type III secretion system pore protein FliP | - |
| QTN46_RS08460 (QTN46_08460) | fliQ | 1579016..1579285 (+) | 270 | WP_013352270.1 | flagellar biosynthesis protein FliQ | - |
| QTN46_RS08465 (QTN46_08465) | fliR | 1579292..1580071 (+) | 780 | WP_013352271.1 | flagellar biosynthetic protein FliR | - |
| QTN46_RS08470 (QTN46_08470) | flhB | 1580071..1581150 (+) | 1080 | WP_289394459.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=774024 QTN46_RS08445 WP_003154238.1 1577313..1577675(+) (pilH) [Bacillus amyloliquefaciens strain SRCM123386]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=774024 QTN46_RS08445 WP_003154238.1 1577313..1577675(+) (pilH) [Bacillus amyloliquefaciens strain SRCM123386]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTCAAAGAGCATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTCAAAGAGCATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |