Detailed information NTG0774018

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: PFY08_RS25520
• Genome accession: NZ_CP115856
• Coordinates: 4960998..4962347 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225362.1
• Uniprot ID: -
• Organism: Bacillus cereus strain PL22-16A
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4955998..4967347

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PFY08_RS25500 (PFY08_25500)	secA	4956323..4958830 (-)	2508	WP_000579385.1	preprotein translocase subunit SecA	-
PFY08_RS25505 (PFY08_25505)	hpf	4959105..4959647 (-)	543	WP_000671185.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
PFY08_RS25510 (PFY08_25510)	cspC	4959970..4960167 (-)	198	WP_001990088.1	cold shock protein CspC	-
PFY08_RS25515 (PFY08_25515)	-	4960294..4960998 (-)	705	WP_013142274.1	ComF family protein	-
PFY08_RS25520 (PFY08_25520)	comFA	4960998..4962347 (-)	1350	WP_000225362.1	ATP-dependent helicase ComFA	Machinery gene
PFY08_RS25525 (PFY08_25525)	-	4962475..4963902 (-)	1428	WP_071740931.1	NlpC/P60 family protein	-
PFY08_RS25530 (PFY08_25530)	-	4964051..4964365 (-)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
PFY08_RS25535 (PFY08_25535)	-	4964538..4965380 (-)	843	WP_000684725.1	DegV family protein	-
PFY08_RS25540 (PFY08_25540)	-	4965617..4966252 (+)	636	WP_000926669.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51174.04 Da
• Isoelectric Point: 9.9910

>NTDB_id=774018 PFY08_RS25520 WP_000225362.1 4960998..4962347(-) (comFA) [Bacillus cereus strain PL22-16A]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVVALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=774018 PFY08_RS25520 WP_000225362.1 4960998..4962347(-) (comFA) [Bacillus cereus strain PL22-16A]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTACTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGTGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49