Detailed information    

insolico Bioinformatically predicted

Overview


Name   hexB   Type   Machinery gene
Locus tag   QTN45_RS11000 Genome accession   NZ_CP128500
Coordinates   2160107..2161984 (-) Length   625 a.a.
NCBI ID   WP_013352326.1    Uniprot ID   A0A9P1JH09
Organism   Bacillus amyloliquefaciens strain SRCM123364     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2155107..2166984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN45_RS10985 (QTN45_10985) - 2156681..2157655 (-) 975 WP_013352329.1 acyltransferase domain-containing protein -
  QTN45_RS10990 (QTN45_10990) fabD 2157790..2158659 (-) 870 WP_013352328.1 ACP S-malonyltransferase -
  QTN45_RS10995 (QTN45_10995) - 2158964..2159641 (-) 678 WP_013352327.1 MBL fold metallo-hydrolase -
  QTN45_RS11000 (QTN45_11000) hexB 2160107..2161984 (-) 1878 WP_013352326.1 DNA mismatch repair endonuclease MutL Machinery gene
  QTN45_RS11005 (QTN45_11005) hexA 2162000..2164585 (-) 2586 WP_014470386.1 DNA mismatch repair protein MutS Machinery gene
  QTN45_RS11010 (QTN45_11010) cotE 2164701..2165246 (-) 546 WP_013352324.1 outer spore coat protein CotE -
  QTN45_RS11015 (QTN45_11015) ymcA 2165500..2165931 (-) 432 WP_013352323.1 RicAFT regulatory complex protein RicA family protein Regulator

Sequence


Protein


Download         Length: 625 a.a.        Molecular weight: 70353.50 Da        Isoelectric Point: 5.9217

>NTDB_id=773895 QTN45_RS11000 WP_013352326.1 2160107..2161984(-) (hexB) [Bacillus amyloliquefaciens strain SRCM123364]
MAKVIQLSDELSNKIAAGEVVERPASVVKELVENAIDANSTVIEIDIEEAGLSSIRVLDNGEGMETEDCKRAFRRHATSK
IKDENDLFRVRTLGFRGEALPSIASVSHLEIKTSIGEGAGTHLILQGGNMISEQRTSSRKGTEIIVTNLFFNTPARLKYM
KTVHTELGNITDVVNRIALAHPEVSIRLRHQGKNLLQTNGNGDVRHVLAAIYGTAVAKKMIPLHVSSLDFEVKGYIALPE
ITRASRNYMSSVINGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPSKLEVRLSKETELHELIRDG
IKEVFQKQRLIPSAQLPKKSAPAPIKNEQQFMTFGESEPERKLPEKTPEPSYSPMKLSSVVKEPAPVTEEEFHPNEADHE
VPSETSMPEMAAPVSDIPAPEEEAVSEEIQEERVPVMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVGQV
EPEVQDMIVPLTFHYAANEALIIEQHQHELESVGVFLEAFGTNSYIVRCHPAWFPKGEEAELIEEIIQQVLDAKQIDIKK
LREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRRTADPFTCPHGRPIIIHHSTYEMEKMFKRVM

Nucleotide


Download         Length: 1878 bp        

>NTDB_id=773895 QTN45_RS11000 WP_013352326.1 2160107..2161984(-) (hexB) [Bacillus amyloliquefaciens strain SRCM123364]
TTGGCAAAAGTCATCCAGCTGTCAGATGAGCTTTCAAATAAAATAGCGGCCGGTGAGGTGGTGGAACGGCCCGCCTCTGT
CGTTAAAGAATTGGTGGAAAACGCAATCGACGCAAACAGCACAGTCATTGAAATCGATATAGAGGAAGCGGGGCTTTCGT
CGATTCGGGTGCTCGACAACGGCGAAGGTATGGAAACCGAGGATTGCAAGCGGGCTTTCCGCCGCCATGCGACCAGTAAA
ATCAAAGATGAAAATGACCTGTTCCGGGTGAGAACACTCGGTTTCCGCGGAGAAGCTTTGCCAAGTATCGCGTCTGTTTC
TCATCTGGAAATCAAAACGAGCATCGGCGAGGGAGCGGGAACTCATCTCATTCTTCAGGGCGGGAATATGATTTCTGAAC
AGAGAACTTCCAGCAGAAAAGGGACGGAGATCATCGTCACTAACCTGTTTTTCAATACACCCGCCAGATTAAAATATATG
AAAACCGTGCATACGGAGCTCGGCAATATTACGGATGTCGTCAACCGGATCGCTCTTGCGCATCCGGAAGTATCGATCCG
CCTCCGCCATCAGGGGAAAAACCTGCTGCAGACAAACGGAAACGGGGACGTGCGCCATGTGCTGGCCGCAATTTACGGGA
CGGCGGTTGCGAAAAAAATGATACCGCTCCATGTCAGCTCACTTGATTTTGAAGTCAAGGGCTACATTGCGCTGCCGGAA
ATCACGCGTGCATCCAGAAACTACATGTCATCTGTCATTAACGGAAGATACATTAAGAATTTCCCGCTTGTAAAAGCGGT
GCATGAGGGCTATCACACGCTTCTGCCGATCGGCCGCCATCCGATTACGTTTATCGAAATTACGATGGATCCGATTTTAG
TCGATGTCAATGTCCATCCGTCGAAGCTTGAAGTCCGCCTCAGCAAAGAGACGGAACTGCATGAGCTGATCCGTGACGGC
ATAAAGGAAGTTTTTCAAAAGCAGCGGCTTATTCCAAGCGCCCAGCTTCCGAAAAAATCAGCGCCGGCACCGATCAAAAA
TGAACAGCAATTTATGACGTTCGGTGAAAGTGAGCCTGAGCGGAAACTGCCTGAAAAAACGCCGGAGCCGTCTTACTCGC
CGATGAAGCTGAGTTCGGTCGTAAAAGAGCCGGCGCCGGTAACAGAAGAAGAGTTTCACCCAAATGAAGCGGATCATGAA
GTGCCGTCGGAAACCAGCATGCCGGAAATGGCTGCGCCTGTTTCTGATATTCCGGCGCCGGAAGAGGAAGCTGTCTCCGA
AGAAATACAGGAAGAAAGAGTTCCGGTCATGTATCCGATCGGCCAAATGCACGGGACATATATTTTAGCCCAAAACGAAA
ACGGCCTGTATATCATTGACCAGCATGCGGCCCAAGAGCGGATTAAATACGAATATTTCCGGGAAAAAGTCGGGCAGGTT
GAGCCTGAAGTGCAGGATATGATCGTGCCGCTCACCTTTCACTATGCGGCAAATGAAGCGCTTATCATTGAACAGCATCA
GCATGAGCTTGAAAGTGTAGGGGTATTTTTAGAAGCTTTCGGCACTAACAGCTATATCGTCCGCTGCCATCCGGCCTGGT
TTCCAAAAGGGGAAGAAGCTGAACTGATTGAAGAAATCATTCAGCAGGTGCTTGACGCCAAACAGATCGACATTAAAAAA
CTTCGGGAGGAAGCCGCCATAATGATGAGCTGCAAAGGCTCGATCAAAGCGAACCGTCATTTGCGCAACGATGAAATCAA
AGCGCTCTTGGACGATCTGCGCCGAACGGCAGACCCGTTCACATGCCCGCACGGCCGGCCGATCATTATTCACCATAGCA
CGTATGAGATGGAAAAGATGTTTAAACGCGTGATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9P1JH09

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexB Streptococcus pneumoniae R6

46.368

100

0.48