Detailed information NTG0773554

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: QSJ13_RS16250
• Genome accession: NZ_CP128372
• Coordinates: 3378415..3379863 (+)
• Length: 482 a.a.
• NCBI ID: WP_000778202.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XH2146
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3373415..3384863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSJ13_RS16250 (QSJ13_16270)	rpoN/rpoN1	3378415..3379863 (+)	1449	WP_000778202.1	RNA polymerase factor sigma-54	Machinery gene
QSJ13_RS16255 (QSJ13_16275)	raiA	3380032..3380370 (+)	339	WP_001167461.1	ribosome-associated translation inhibitor RaiA	-
QSJ13_RS16260 (QSJ13_16280)	ibaG	3380509..3380760 (+)	252	WP_001083680.1	BolA family iron metabolism protein IbaG	-
QSJ13_RS16265 (QSJ13_16285)	murA	3380767..3382023 (+)	1257	WP_000357156.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
QSJ13_RS16270 (QSJ13_16290)	hisG	3382023..3382706 (+)	684	WP_001000724.1	ATP phosphoribosyltransferase	-
QSJ13_RS16275 (QSJ13_16295)	hisD	3382812..3384101 (+)	1290	WP_002036490.1	histidinol dehydrogenase	-

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55082.97 Da
• Isoelectric Point: 4.6620

>NTDB_id=773554 QSJ13_RS16250 WP_000778202.1 3378415..3379863(+) (rpoN/rpoN1) [Acinetobacter baumannii strain XH2146]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLSTLEHKETDDLTTELNADHLP
DDLPVDTEWDDIYTHQSTALGTPEFEEREDNRQVHLTLKEHILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEII
LAVQHLLSEMDIDEEVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYELLIANDLNKL
LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTTGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=773554 QSJ13_RS16250 WP_000778202.1 3378415..3379863(+) (rpoN/rpoN1) [Acinetobacter baumannii strain XH2146]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAATTCATTATCGTTAACGCCTCAATTGCAGCAGGCAATCCGTTTACTACA
ACTTTCTAGCCTAGAGTTAGAGCAAGAAATCCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTAGAAGATGAAT
CACTAGCAGAAAGTTTATCTACTTTAGAACACAAAGAAACTGATGACCTTACAACAGAGTTGAATGCTGATCACTTACCT
GATGACTTGCCTGTTGATACTGAATGGGATGACATTTATACACATCAATCCACTGCTTTGGGTACTCCTGAGTTCGAAGA
GCGTGAAGATAATCGCCAAGTACACCTGACGCTTAAAGAACATATTTTGGAGCAAGTGAACTTACTACATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGCATAGTTGATGCTTTAGATGATAAAGGTTTTTTGGATGCTGAATTAGAAGAGATTATT
TTGGCAGTACAGCATTTATTAAGTGAGATGGATATAGACGAGGAAGTGGAAGAGGATGAAGTTTTAGTAGTCTTAAAACA
TATTCAACGTCTTGATCCAATTGGTATCGGAGCTCGTAATTTAGCTGAATGTTTAAAAGTTCAGTTGGAGTTTTTGCCTC
GAGAAACTGAATATTTGAAAGAAGCCAGAAGTCTACTTCAATATTACGAATTACTGATTGCAAATGATCTTAATAAATTA
TTGAAGCAAACAGGGCTTTCCAAAGAACAGTTAAAATTTGCAGTTGATTTATTAAAAACATTAAAGCCTTATCCAGGCAT
GGATTTTGAAAAGCAAGAATCAGAATATCAAATTCCTGATGTAGTCGTTGCCAAGAAGGACTTGCATTGGCAAGTTCAGT
TAAATCCTGATGTGATGCCAAAATTAAGAATCAATTCTTTTTATTCGAGTATGATTCGTAGGGCAGATCAAAGTGATGAT
AATTTATACCTACGTAATCAAATGCTTGAGGCTAAAAATTTTATAAAAAGTATTGATGAACGGCACAAAACATTATTAAA
AGTTGCGACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCCGAAGCAATGAAACCCTTAGTACTAAGGG
ATGTTGCAGAAGAAGTAGAATTACATGAGTCGACCGTTTCTCGCGTTACCACAAATAAGTATATGCTTACTCCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGTCATGTGGGGACAACCACAGGAGGTGAGGCTTCTTCTACCGCAATTCGGGC
GATGATTAAAAAGTTAGTTTCTAATGAAAATCCGCGTAAACCTTTGTCTGATAATGCAATTGCTGCTTTATTGAAAGAAG
AGGGAATAGAAGTAGCTAGAAGGACTGTAGCAAAATATAGAGAATCGTTACATATTCCATCGTCATCCGAGAGAAAAGTC
TTGATCTAA

Domains

Predicted by InterProScan.

• Sigma-54 factor, core binding domain (Sigma54_CBD) (111-308)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	43.333	100	0.459