Detailed information NTG0773307

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QRX22_RS00930
• Genome accession: NZ_CP128255
• Coordinates: 191727..192710 (+)
• Length: 327 a.a.
• NCBI ID: WP_021531678.1
• Uniprot ID: -
• Organism: Escherichia coli strain T309.Ta3
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 186727..197710

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRX22_RS00910 (QRX22_00910)	dppA	187871..189478 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
QRX22_RS00915 (QRX22_00915)	-	189540..189767 (-)	228	WP_000198576.1	hypothetical protein	-
QRX22_RS00920 (QRX22_00920)	dppB	189785..190804 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
QRX22_RS00925 (QRX22_00925)	dppC	190814..191716 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
QRX22_RS00930 (QRX22_00930)	amiE	191727..192710 (+)	984	WP_021531678.1	dipeptide ABC transporter ATP-binding protein	Regulator
QRX22_RS00935 (QRX22_00935)	dppF	192707..193711 (+)	1005	WP_000103570.1	dipeptide ABC transporter ATP-binding subunit DppF	-
QRX22_RS00940 (QRX22_00940)	yhjV	193741..195012 (-)	1272	WP_014640225.1	aromatic amino acid transport family protein	-
QRX22_RS00945 (QRX22_00945)	ldrD	195488..195595 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QRX22_RS00950 (QRX22_00950)	bcsG	195682..197361 (-)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
QRX22_RS00955 (QRX22_00955)	bcsF	197358..197549 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35791.34 Da
• Isoelectric Point: 6.5813

>NTDB_id=773307 QRX22_RS00930 WP_021531678.1 191727..192710(+) (amiE) [Escherichia coli strain T309.Ta3]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYSHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=773307 QRX22_RS00930 WP_021531678.1 191727..192710(+) (amiE) [Escherichia coli strain T309.Ta3]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAATTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACTCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMG 18311	42.679	98.165	0.419
amiE	Streptococcus thermophilus LMD-9	42.679	98.165	0.419
oppD	Streptococcus mutans UA159	41.066	97.554	0.401