Detailed information NTG0773030

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QRT07_RS08695
• Genome accession: NZ_CP127846
• Coordinates: 1851699..1852679 (+)
• Length: 326 a.a.
• NCBI ID: WP_286089396.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain VP16
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1846699..1857679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRT07_RS08675 (QRT07_08675)	-	1847056..1848666 (+)	1611	WP_025635157.1	peptide ABC transporter substrate-binding protein	-
QRT07_RS08680 (QRT07_08680)	oppB	1848833..1849753 (+)	921	WP_017448601.1	oligopeptide ABC transporter permease OppB	-
QRT07_RS08685 (QRT07_08685)	-	1849763..1850695 (+)	933	WP_017448602.1	ABC transporter permease subunit	-
QRT07_RS08690 (QRT07_08690)	-	1850706..1851689 (+)	984	WP_021449172.1	oligopeptide/dipeptide ABC transporter ATP-binding protein	-
QRT07_RS08695 (QRT07_08695)	amiE	1851699..1852679 (+)	981	WP_286089396.1	oligopeptide/dipeptide ABC transporter ATP-binding protein	Regulator
QRT07_RS08700 (QRT07_08700)	-	1852689..1854485 (+)	1797	WP_286089397.1	aminopeptidase P family protein	-
QRT07_RS08705 (QRT07_08705)	-	1854738..1857182 (-)	2445	WP_025634449.1	collagenase	-

Sequence

Protein

• Length: 326 a.a.
• Molecular weight: 36531.29 Da
• Isoelectric Point: 7.9108

>NTDB_id=773030 QRT07_RS08695 WP_286089396.1 1851699..1852679(+) (amiE) [Vibrio parahaemolyticus strain VP16]
MNQKEVLLSARDLQVHFPVSRHLIPSRRKIVQAVNGIDLDVYRGETLGIVGESGCGKSTLARALLRLVEPTHGKLTWKGE
DMRGFSKNKLARRRQEFQMIFQDPSASLNPRLTISECIAEPLLTHQPQLKRAEVEKRVIEMMDKVGLLASQRNRYPHEFS
GGQCQRVGIARALILNPDLVVCDEPVSALDVSIQAQVINLLDDLKQEMGLTLVMIAHDLSVVRHISDRVMVMYLGKPMEV
GRYDQVFDDAHHPYTKALLSAVPIANPQLARNRDIQLLPGDLPSPLNPPSGCVFRTRCPEATELCGQQSPVKTDTEQHHI
YCSNMI

Nucleotide

• Length: 981 bp

>NTDB_id=773030 QRT07_RS08695 WP_286089396.1 1851699..1852679(+) (amiE) [Vibrio parahaemolyticus strain VP16]
ATGAATCAGAAAGAAGTGTTATTGTCCGCTCGCGATCTGCAAGTGCATTTTCCTGTTTCGCGACACCTCATTCCGAGCCG
AAGAAAGATCGTACAAGCCGTCAACGGCATCGATTTGGATGTTTATCGAGGCGAAACGCTCGGCATTGTTGGCGAATCAG
GCTGCGGAAAATCCACCTTAGCGCGTGCTCTGCTGCGCTTAGTTGAACCCACGCACGGTAAGCTCACTTGGAAAGGTGAA
GACATGCGTGGCTTCAGCAAAAACAAGTTAGCGCGTCGTCGCCAAGAATTTCAGATGATATTCCAAGACCCATCGGCGAG
CCTCAATCCGAGATTGACGATTTCAGAATGTATCGCAGAGCCGTTACTCACACACCAGCCTCAACTTAAACGCGCCGAAG
TCGAAAAACGCGTCATTGAGATGATGGACAAAGTGGGTCTGTTGGCAAGCCAACGTAACCGATATCCGCATGAGTTTTCT
GGCGGTCAGTGCCAACGTGTTGGCATCGCGCGAGCCTTAATCCTCAATCCGGACTTGGTGGTGTGTGATGAACCCGTCAG
CGCATTGGATGTCTCGATTCAAGCGCAGGTCATTAATTTGCTCGACGACCTTAAACAAGAAATGGGACTGACACTGGTGA
TGATCGCTCATGACCTAAGCGTTGTGCGTCATATCAGCGACCGAGTGATGGTGATGTACCTTGGCAAACCAATGGAAGTG
GGACGCTACGACCAAGTGTTCGACGATGCTCATCATCCCTACACAAAAGCATTGCTTTCTGCGGTACCGATTGCCAATCC
GCAACTTGCACGCAACCGCGACATCCAATTGTTGCCCGGAGACCTCCCCTCTCCGCTCAACCCACCCAGCGGTTGTGTTT
TTAGAACCCGATGCCCAGAAGCTACGGAACTATGTGGGCAGCAAAGCCCAGTCAAAACAGACACTGAGCAACATCATATT
TACTGTTCAAACATGATTTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (35-186)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (238-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	40.514	95.399	0.386
amiE	Streptococcus thermophilus LMD-9	40.514	95.399	0.386
amiF	Streptococcus salivarius strain HSISS4	45.455	84.356	0.383
amiF	Streptococcus thermophilus LMG 18311	45.788	83.742	0.383
amiE	Streptococcus salivarius strain HSISS4	39.744	95.706	0.38
amiF	Streptococcus thermophilus LMD-9	44.765	84.969	0.38
oppD	Streptococcus mutans UA159	38.019	96.012	0.365