Detailed information NTG0772995

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: QRT07_RS01865
• Genome accession: NZ_CP127846
• Coordinates: 394892..397714 (-)
• Length: 940 a.a.
• NCBI ID: WP_025510316.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain VP16
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 389892..402714

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRT07_RS01855 (QRT07_01855)	-	391807..392928 (+)	1122	WP_015297341.1	alanine--glyoxylate aminotransferase family protein	-
QRT07_RS01860 (QRT07_01860)	-	393046..394824 (-)	1779	WP_020835328.1	PglL family O-oligosaccharyltransferase	-
QRT07_RS01865 (QRT07_01865)	uvrA	394892..397714 (-)	2823	WP_025510316.1	excinuclease ABC subunit UvrA	Machinery gene
QRT07_RS01870 (QRT07_01870)	galU	397852..398724 (-)	873	WP_005466627.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
QRT07_RS01875 (QRT07_01875)	qstR	398982..399626 (-)	645	WP_005480993.1	LuxR C-terminal-related transcriptional regulator	Regulator
QRT07_RS01880 (QRT07_01880)	ssb	399905..400435 (+)	531	WP_005466625.1	single-stranded DNA-binding protein	Machinery gene
QRT07_RS01885 (QRT07_01885)	csrD	400676..402685 (+)	2010	WP_020835330.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103910.19 Da
• Isoelectric Point: 6.5419

>NTDB_id=772995 QRT07_RS01865 WP_025510316.1 394892..397714(-) (uvrA) [Vibrio parahaemolyticus strain VP16]
MDKIEVRGARTHNLKDINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHAPLAAQTVSQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPTLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVIAPMDGD
GEEIIFSANFACPQCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDDSLSLAQGAIRGWDQKNYYYFQML
TSLADHYGFDLHAPFNSLPKKTQDVILKGSGRTEIEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALTFFQTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDPKKTVELLGATGNNLKNVNLSIPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKSIKGLEYFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=772995 QRT07_RS01865 WP_025510316.1 394892..397714(-) (uvrA) [Vibrio parahaemolyticus strain VP16]
ATGGATAAAATAGAAGTTCGCGGTGCCCGAACCCATAACCTCAAAGACATCAATCTGACTATTCCTCGCGATAAACTGAC
AGTAATTACTGGGTTAAGCGGCTCCGGTAAGTCCTCTCTCGCATTCGATACCTTATATGCAGAAGGCCAACGACGTTATG
TCGAATCACTGTCTGCTTATGCTCGTCAGTTTTTGTCTCTTATGGAAAAACCAGATGTCGACCATATCGAAGGTTTATCA
CCGGCGATTTCTATTGAACAAAAATCGACATCTCATAACCCTCGCTCAACCGTCGGTACCATCACCGAAGTTTACGACTA
CTTACGTCTGCTTTACGCTCGTGTTGGTGAACCACGCTGTCCTACTCACCACGCCCCATTAGCCGCACAAACTGTCAGCC
AGATGGTGGATAAAGTATTGGAACTGCCAGAAGGCAGTAAAATGATGCTGCTTGCTCCAATCGTAAAAGAGCGCAAAGGT
GAGCATGTAAAAACACTAGAAAACCTTGCCGCACAAGGTTTTATTCGAGCGCGTATTGACGGCGAAACTTGCGATCTTTC
AGATCCACCAACACTTGAGCTACACAAAAAACACACCATTGAAGTCGTGGTCGACCGATTCAAAGTTCGCCCAGATCTGC
AACAACGTTTAGCAGAGTCATTTGAGACGACGCTAGAGCTTTCTGGTGGTATTGCGGTGATTGCTCCGATGGATGGCGAT
GGGGAAGAAATCATCTTTTCAGCGAACTTCGCTTGTCCGCAATGTGGCTACAGCATGCAAGAGCTGGAACCGAGATTGTT
CTCATTTAACAACCCAGCAGGCGCGTGTGGAACTTGTGATGGCTTGGGTGTACAACAGTATTTTGATCCAAGCCGAGTGA
TTCAAGATGACTCACTCAGTTTGGCACAAGGTGCCATTCGTGGTTGGGATCAAAAGAATTACTATTACTTCCAAATGCTG
ACTTCATTGGCGGATCATTATGGATTTGATTTGCATGCTCCGTTCAACTCTCTGCCAAAGAAAACGCAAGACGTTATTCT
CAAAGGCTCAGGCCGCACCGAGATCGAGTTTAAATACATCAATGATCGCGGCGACATTCGTGTAAAGCGCCACCCATTCG
AAGGGATTTTAAATACGCTTGAACGTCGTTACCGCGACACCGAGTCCAACTCGGTTCGAGAAGAGTTGGCCAAATACATC
TCGACAAAATCATGCTCAAGCTGTGGCGGTACTCGTCTACGCCTTGAAGCACGTAATGTATTTATTGCCGATACCACCTT
ACCTGAGATCGTTGAGCTCAGTATTGCAGATGCCCTTACCTTCTTCCAAACACTCAAGCTAGAAGGTCAACGTGCGCAAA
TTGCAGAAAAGGTCATGAAGGAGATCAATGATCGTCTACAGTTCCTTGTAAATGTGGGCTTGAACTACCTTAATTTATCC
CGGAGTGCAGAGACGCTATCCGGTGGCGAAGCACAACGCATTCGCTTAGCGAGCCAAATTGGTGCAGGTCTTGTTGGTGT
CATGTACGTATTAGATGAACCGTCGATTGGCCTCCACCAGCGTGATAACGAACGACTCCTAAAAACACTGACTCATTTGC
GCGATTTAGGTAATACCGTACTCGTGGTCGAACACGATGAAGATGCCATTCGCTGTGCCGATCACGTGATTGATATTGGC
CCGGGAGCAGGGGTACATGGCGGTAATGTGGTTGCCGAAGGAACGATGGACGAGATCATCGCCAACCCGAACTCTCTCAC
AGGTCAGTATCTAAGTGGCGCAAAAGAGATAGCAGTCCCTAAAGAGCGTACCCCTCGCGATCCAAAGAAAACCGTCGAGC
TACTAGGCGCAACAGGTAACAACCTGAAGAACGTCAACTTGTCTATTCCTGTCGGATTGTTTAGCTGTATTACTGGCGTG
TCAGGCTCCGGTAAATCAACCTTGATCAACGATACGTTCTTCAAAATTGCACACACCCAACTCAATGGCGCTACTACTGC
ACACCCATCGCCTTATAAGTCGATTAAAGGTCTAGAATATTTCGATAAGGTTATCGACATCGATCAAAGCCCAATTGGCC
GAACACCACGCTCGAACCCTGCGACGTACACGGGAATCTTTACCCCTATTCGCGAGCTGTTTGCTGGTACGCAGGAATCA
CGTTCACGTGGTTACAAACCTGGCCGCTTTAGTTTTAACGTTCGTGGTGGTCGCTGTGAAGCTTGTCAGGGGGATGGTGT
TATCAAAGTCGAGATGCACTTCTTACCAGACGTGTACGTGCCATGTGATGTGTGTAAAGGGAAGCGCTATAACCGCGAAA
CACTGGAAGTACGCTACAAAGGCAAAACCATCGATGAAGTACTGGAAATGACCGTCGAGGATGCTCGCACCTTCTTCGAT
CCTGTTCCTGCGATTGCCCGCAAGCTGCAAACTCTAATGGACGTTGGTCTGTCTTACATTCGTTTAGGTCAAGCGGCAAC
CACATTATCAGGCGGCGAAGCGCAGCGAGTGAAATTGGCAAGAGAGCTATCCAAGCGTGATACGGGTAAAACCTTGTACA
TTCTAGATGAGCCAACAACTGGTCTGCACTTCCATGATATTCAGCAGCTATTGACCGTACTTCATCGCCTGCGCGATCAC
GGGAATACCGTTGTGGTTATCGAGCATAACTTGGACGTCATCAAAACAGCAGACTGGATCATCGACTTAGGACCAGAAGG
CGGACAAGGTGGCGGAGAGATCATTGCACAGGGAACACCAGAAGATGTGTCTCAGATCGAAGGTTCGCACACAGCTCGAT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.749	100	0.579
uvrA	Streptococcus pneumoniae TIGR4	57.749	100	0.579
uvrA	Streptococcus pneumoniae D39	57.749	100	0.579