Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   QRS93_RS06055 Genome accession   NZ_CP127842
Coordinates   1212412..1212891 (-) Length   159 a.a.
NCBI ID   WP_003058929.1    Uniprot ID   A0ABU0AAE0
Organism   Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1207412..1217891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRS93_RS06040 (QRS93_06040) - 1208230..1209882 (+) 1653 WP_003059818.1 NFACT family protein -
  QRS93_RS06045 (QRS93_06045) - 1209945..1211192 (-) 1248 WP_042357937.1 CDC27 family protein -
  QRS93_RS06050 (QRS93_06050) - 1211182..1212363 (-) 1182 WP_065354958.1 AI-2E family transporter -
  QRS93_RS06055 (QRS93_06055) mutX 1212412..1212891 (-) 480 WP_003058929.1 8-oxo-dGTP diphosphatase Machinery gene
  QRS93_RS06060 (QRS93_06060) - 1213087..1213278 (+) 192 WP_003058922.1 hypothetical protein -
  QRS93_RS10330 - 1213366..1213800 (-) 435 WP_012767129.1 CPBP family intramembrane glutamic endopeptidase -
  QRS93_RS06070 (QRS93_06070) - 1213697..1214101 (-) 405 WP_152652474.1 hypothetical protein -
  QRS93_RS06075 (QRS93_06075) rfbB 1214290..1215333 (-) 1044 WP_003057682.1 dTDP-glucose 4,6-dehydratase -
  QRS93_RS06080 (QRS93_06080) - 1215577..1216170 (-) 594 WP_003057688.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  QRS93_RS06085 (QRS93_06085) rfbA 1216170..1217039 (-) 870 WP_003057684.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18574.75 Da        Isoelectric Point: 4.2471

>NTDB_id=772937 QRS93_RS06055 WP_003058929.1 1212412..1212891(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=772937 QRS93_RS06055 WP_003058929.1 1212412..1212891(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGAGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686