Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | IDSSA_RS12640 | Genome accession | NZ_AP025249 |
| Coordinates | 2456240..2456710 (+) | Length | 156 a.a. |
| NCBI ID | WP_000164421.1 | Uniprot ID | P65329 |
| Organism | Staphylococcus aureus strain IDSA1 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2451240..2461710
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IDSSA_RS12620 (IDSSA_0124510) | coaW | 2451549..2452352 (+) | 804 | WP_000862727.1 | type II pantothenate kinase | - |
| IDSSA_RS12625 (IDSSA_0124520) | - | 2452482..2453153 (-) | 672 | WP_000120549.1 | DUF2750 domain-containing protein | - |
| IDSSA_RS12630 (IDSSA_0124530) | - | 2453552..2454745 (-) | 1194 | WP_000183726.1 | hypothetical protein | - |
| IDSSA_RS12635 (IDSSA_0124540) | - | 2454745..2455929 (-) | 1185 | WP_001291500.1 | M20 family metallopeptidase | - |
| IDSSA_RS12640 (IDSSA_0124550) | luxS | 2456240..2456710 (+) | 471 | WP_000164421.1 | S-ribosylhomocysteine lyase | Regulator |
| IDSSA_RS12645 (IDSSA_0124560) | - | 2456862..2457212 (-) | 351 | WP_001024035.1 | membrane protein | - |
| IDSSA_RS12650 (IDSSA_0124570) | - | 2457226..2458527 (-) | 1302 | WP_001242320.1 | pyrimidine-nucleoside phosphorylase | - |
| IDSSA_RS12655 (IDSSA_0124580) | deoC | 2458806..2459468 (-) | 663 | WP_001083311.1 | deoxyribose-phosphate aldolase | - |
| IDSSA_RS12660 (IDSSA_0124590) | deoD | 2459783..2460493 (+) | 711 | WP_000160304.1 | purine-nucleoside phosphorylase | - |
| IDSSA_RS12665 (IDSSA_0124600) | - | 2460614..2461057 (-) | 444 | WP_000070866.1 | Dps family protein | - |
| IDSSA_RS12670 (IDSSA_0124610) | - | 2461257..2461670 (-) | 414 | WP_001123303.1 | DUF393 domain-containing protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17513.76 Da Isoelectric Point: 5.4567
>NTDB_id=77281 IDSSA_RS12640 WP_000164421.1 2456240..2456710(+) (luxS) [Staphylococcus aureus strain IDSA1]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK
Nucleotide
Download Length: 471 bp
>NTDB_id=77281 IDSSA_RS12640 WP_000164421.1 2456240..2456710(+) (luxS) [Staphylococcus aureus strain IDSA1]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAGGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAGGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
44.681 |
90.385 |
0.404 |