Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   PAN99_RS14900 Genome accession   NZ_CP115604
Coordinates   3048925..3049065 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain FJAT-54560     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3043925..3054065
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PAN99_RS14875 (PAN99_14875) - 3044252..3044635 (-) 384 WP_044052949.1 hotdog fold thioesterase -
  PAN99_RS14880 (PAN99_14880) comA 3044657..3045301 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  PAN99_RS14885 (PAN99_14885) comP 3045382..3047688 (-) 2307 WP_044052948.1 sensor histidine kinase Regulator
  PAN99_RS14890 (PAN99_14890) comX 3047707..3047883 (-) 177 WP_044052947.1 competence pheromone ComX -
  PAN99_RS14895 (PAN99_14895) - 3047898..3048773 (-) 876 WP_026092320.1 polyprenyl synthetase family protein -
  PAN99_RS14900 (PAN99_14900) degQ 3048925..3049065 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  PAN99_RS14905 (PAN99_14905) - 3049531..3049872 (+) 342 WP_014305721.1 hypothetical protein -
  PAN99_RS14910 (PAN99_14910) - 3049879..3051099 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  PAN99_RS14915 (PAN99_14915) - 3051229..3052695 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  PAN99_RS14920 (PAN99_14920) - 3052713..3053264 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  PAN99_RS14925 (PAN99_14925) - 3053361..3053759 (-) 399 WP_003152031.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=772748 PAN99_RS14900 WP_003152043.1 3048925..3049065(-) (degQ) [Bacillus velezensis strain FJAT-54560]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=772748 PAN99_RS14900 WP_003152043.1 3048925..3049065(-) (degQ) [Bacillus velezensis strain FJAT-54560]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891