Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   PAN99_RS01755 Genome accession   NZ_CP115604
Coordinates   322469..322867 (-) Length   132 a.a.
NCBI ID   WP_014304317.1    Uniprot ID   -
Organism   Bacillus velezensis strain FJAT-54560     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 317469..327867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PAN99_RS01720 (PAN99_01720) - 318469..318633 (-) 165 WP_370648487.1 molybdopterin dinucleotide binding domain-containing protein -
  PAN99_RS01725 (PAN99_01725) - 318747..319949 (+) 1203 WP_032857854.1 GTP-binding protein -
  PAN99_RS01730 (PAN99_01730) - 320014..321150 (+) 1137 WP_003156594.1 zinc-dependent alcohol dehydrogenase -
  PAN99_RS01735 (PAN99_01735) - 321165..321599 (+) 435 WP_003156592.1 RDD family protein -
  PAN99_RS01740 (PAN99_01740) - 321716..321991 (+) 276 WP_369719109.1 YckD family protein -
  PAN99_RS01745 (PAN99_01745) - 322095..322211 (+) 117 WP_015388718.1 family 1 glycosylhydrolase -
  PAN99_RS01750 (PAN99_01750) - 322210..322428 (+) 219 Protein_304 family 1 glycosylhydrolase -
  PAN99_RS01755 (PAN99_01755) nin/comJ 322469..322867 (-) 399 WP_014304317.1 competence protein ComJ Regulator
  PAN99_RS01760 (PAN99_01760) nucA/comI 322889..323326 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  PAN99_RS01765 (PAN99_01765) hxlB 323685..324242 (-) 558 WP_003156587.1 6-phospho-3-hexuloisomerase -
  PAN99_RS01770 (PAN99_01770) hxlA 324239..324874 (-) 636 WP_024084873.1 3-hexulose-6-phosphate synthase -
  PAN99_RS01775 (PAN99_01775) - 325106..325468 (+) 363 WP_014304320.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15049.01 Da        Isoelectric Point: 4.6564

>NTDB_id=772693 PAN99_RS01755 WP_014304317.1 322469..322867(-) (nin/comJ) [Bacillus velezensis strain FJAT-54560]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVFRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=772693 PAN99_RS01755 WP_014304317.1 322469..322867(-) (nin/comJ) [Bacillus velezensis strain FJAT-54560]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCGTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTCGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCTTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTAATGTCAAAGCGGCTTTTCTTTAATATTCCAAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

77.519

97.727

0.758