Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   QR565_RS10060 Genome accession   NZ_CP127387
Coordinates   2164307..2164663 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain 101901100740-1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2159307..2169663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QR565_RS10035 fabF 2159519..2160763 (+) 1245 WP_033998511.1 beta-ketoacyl-ACP synthase II -
  QR565_RS10040 pabC 2160763..2161578 (+) 816 WP_003110198.1 aminodeoxychorismate lyase -
  QR565_RS10045 mltG 2161584..2162633 (+) 1050 WP_003104128.1 endolytic transglycosylase MltG -
  QR565_RS10050 tmk 2162662..2163294 (+) 633 WP_003122486.1 dTMP kinase -
  QR565_RS10055 - 2163287..2164273 (+) 987 WP_003104126.1 DNA polymerase III subunit delta' -
  QR565_RS10060 pilZ 2164307..2164663 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  QR565_RS10065 - 2164678..2165454 (+) 777 WP_003091117.1 TatD family hydrolase -
  QR565_RS10070 - 2165680..2166813 (-) 1134 WP_003118082.1 aminotransferase class V-fold PLP-dependent enzyme -
  QR565_RS10075 - 2166899..2167537 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  QR565_RS10080 - 2167687..2168583 (+) 897 WP_033998515.1 radical SAM protein -
  QR565_RS10085 - 2168648..2169280 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=772580 QR565_RS10060 WP_003091119.1 2164307..2164663(+) (pilZ) [Pseudomonas aeruginosa strain 101901100740-1]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=772580 QR565_RS10060 WP_003091119.1 2164307..2164663(+) (pilZ) [Pseudomonas aeruginosa strain 101901100740-1]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains

Predicted by InterProScan.

PilZ domain (PilZ)

(17-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449
  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449