Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   QRA12_RS06855 Genome accession   NZ_CP127345
Coordinates   1417567..1418241 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain MRSA11     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1412567..1423241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA12_RS06830 (QRA12_06825) - 1412747..1413814 (+) 1068 WP_000980137.1 membrane protein -
  QRA12_RS06835 (QRA12_06830) - 1413964..1415007 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  QRA12_RS06840 (QRA12_06835) - 1415372..1415800 (+) 429 WP_000198504.1 hypothetical protein -
  QRA12_RS06845 (QRA12_06840) - 1416009..1416515 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QRA12_RS06850 (QRA12_06845) graX 1416628..1417551 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  QRA12_RS06855 (QRA12_06850) braR 1417567..1418241 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  QRA12_RS06860 (QRA12_06855) graS 1418234..1419274 (+) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  QRA12_RS06865 (QRA12_06860) vraF 1419418..1420179 (+) 762 WP_406707353.1 ABC transporter ATP-binding protein VraF -
  QRA12_RS06870 (QRA12_06865) vraG 1420169..1422058 (+) 1890 WP_000143627.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=772481 QRA12_RS06855 WP_001166500.1 1417567..1418241(+) (braR) [Staphylococcus aureus strain MRSA11]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=772481 QRA12_RS06855 WP_001166500.1 1417567..1418241(+) (braR) [Staphylococcus aureus strain MRSA11]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397