Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSG8_RS20410 Genome accession   NZ_AP025224
Coordinates   3810310..3810999 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis subsp. natto strain G8     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3805310..3815999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSG8_RS20390 (BSG8_40440) yxeA 3806239..3806586 (-) 348 WP_003227084.1 YxeA family protein -
  BSG8_RS20395 (BSG8_40450) yxdM 3806600..3808484 (-) 1885 Protein_4025 ABC transporter permease YxdM -
  BSG8_RS20400 tpeL 3808459..3809192 (-) 734 Protein_4026 ABC transporter ATP-binding protein -
  BSG8_RS20405 (BSG8_40490) yxdK 3809336..3810313 (-) 978 WP_014481410.1 two-component system sensor histidine kinase YxdK -
  BSG8_RS20410 (BSG8_40500) braR 3810310..3810999 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  BSG8_RS20415 (BSG8_40510) iolJ 3811107..3811979 (-) 873 WP_014481411.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  BSG8_RS20420 (BSG8_40520) iolI 3812000..3812836 (-) 837 WP_014481412.1 2-keto-myo-inositol isomerase -
  BSG8_RS20425 (BSG8_40530) iolH 3812922..3813791 (-) 870 WP_014481413.1 sugar phosphate isomerase/epimerase -
  BSG8_RS20430 (BSG8_40540) iolG 3813811..3814845 (-) 1035 WP_014481414.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=77190 BSG8_RS20410 WP_003243527.1 3810310..3810999(-) (braR) [Bacillus subtilis subsp. natto strain G8]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=77190 BSG8_RS20410 WP_003243527.1 3810310..3810999(-) (braR) [Bacillus subtilis subsp. natto strain G8]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATACCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment