Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   GVV68_RS24905 Genome accession   NZ_CP115307
Coordinates   4079107..4079901 (-) Length   264 a.a.
NCBI ID   WP_270173586.1    Uniprot ID   -
Organism   Bacillus cereus strain BC-01     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4074107..4084901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GVV68_RS24880 (GVV68_24885) - 4074634..4076706 (-) 2073 WP_000810974.1 sigma-54 interaction domain-containing protein -
  GVV68_RS24885 (GVV68_24890) - 4076844..4077077 (+) 234 WP_001190210.1 DUF2627 domain-containing protein -
  GVV68_RS24890 (GVV68_24895) - 4077127..4077855 (-) 729 WP_000172580.1 glycerophosphodiester phosphodiesterase -
  GVV68_RS24895 (GVV68_24900) - 4077906..4078052 (+) 147 WP_001247671.1 YycC family protein -
  GVV68_RS24900 (GVV68_24905) - 4078291..4078854 (-) 564 WP_000428232.1 PRK06770 family protein -
  GVV68_RS24905 (GVV68_24910) spo0A 4079107..4079901 (-) 795 WP_270173586.1 sporulation transcription factor Spo0A Regulator
  GVV68_RS24910 (GVV68_24915) spoIVB 4080192..4081490 (-) 1299 WP_002000940.1 SpoIVB peptidase -
  GVV68_RS24915 (GVV68_24920) recN 4081609..4083348 (-) 1740 WP_000947765.1 DNA repair protein RecN Machinery gene
  GVV68_RS24920 (GVV68_24925) argR 4083613..4084062 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29503.24 Da        Isoelectric Point: 6.8441

>NTDB_id=771789 GVV68_RS24905 WP_270173586.1 4079107..4079901(-) (spo0A) [Bacillus cereus strain BC-01]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDDLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANTMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=771789 GVV68_RS24905 WP_270173586.1 4079107..4079901(-) (spo0A) [Bacillus cereus strain BC-01]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGATTTAGCTGTATTGGAGAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTTGGCCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACACTATGATTAAGCGTCCAC
TACCATCATTCCGATCAGCCACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAATGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGTTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814