Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   BSG8_RS15590 Genome accession   NZ_AP025224
Coordinates   2892870..2893733 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis subsp. natto strain G8     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2887870..2898733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSG8_RS15555 (BSG8_30770) mrpE 2888038..2888514 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  BSG8_RS15560 (BSG8_30780) mrpF 2888514..2888798 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  BSG8_RS15565 (BSG8_30790) mnhG 2888782..2889156 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  BSG8_RS15570 (BSG8_30800) yuxO 2889195..2889575 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  BSG8_RS15575 (BSG8_30810) comA 2889594..2890238 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  BSG8_RS15580 (BSG8_30820) comP 2890319..2892631 (-) 2313 WP_014480703.1 sensor histidine kinase Regulator
  BSG8_RS15585 (BSG8_30830) comX 2892647..2892868 (-) 222 WP_014480704.1 competence pheromone ComX -
  BSG8_RS15590 (BSG8_30840) comQ 2892870..2893733 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  BSG8_RS15595 (BSG8_30850) degQ 2893918..2894058 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  BSG8_RS15600 - 2894280..2894405 (+) 126 WP_003228793.1 hypothetical protein -
  BSG8_RS15605 (BSG8_30860) - 2894519..2894887 (+) 369 WP_014477834.1 hypothetical protein -
  BSG8_RS15610 (BSG8_30870) pdeH 2894863..2896092 (-) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -
  BSG8_RS15615 (BSG8_30880) pncB 2896228..2897700 (-) 1473 WP_014480708.1 nicotinate phosphoribosyltransferase -
  BSG8_RS15620 (BSG8_30890) pncA 2897716..2898267 (-) 552 WP_014480709.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=77167 BSG8_RS15590 WP_014480705.1 2892870..2893733(-) (comQ) [Bacillus subtilis subsp. natto strain G8]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=77167 BSG8_RS15590 WP_014480705.1 2892870..2893733(-) (comQ) [Bacillus subtilis subsp. natto strain G8]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains


Predicted by InterProScan.

(45-195)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439


Multiple sequence alignment