Detailed information NTG0771654

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QQ972_RS05195
• Genome accession: NZ_CP127255
• Coordinates: 1072570..1073595 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain Q5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1067570..1078595

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQ972_RS05165 (QQ972_05165)	zapB	1067655..1067900 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
QQ972_RS05170 (QQ972_05170)	rraA	1067984..1068469 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QQ972_RS05175 (QQ972_05175)	menA	1068562..1069488 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QQ972_RS05180 (QQ972_05180)	hslU	1069555..1070886 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
QQ972_RS05185 (QQ972_05185)	hslV	1070896..1071426 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QQ972_RS05190 (QQ972_05190)	ftsN	1071519..1072478 (-)	960	WP_000068834.1	cell division protein FtsN	-
QQ972_RS05195 (QQ972_05195)	cytR	1072570..1073595 (-)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
QQ972_RS05200 (QQ972_05200)	priA	1073751..1075949 (-)	2199	WP_001334265.1	primosomal protein N'	Machinery gene
QQ972_RS05205 (QQ972_05205)	rpmE	1076152..1076364 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
QQ972_RS05210 (QQ972_05210)	yiiX	1076425..1077033 (-)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
QQ972_RS05215 (QQ972_05215)	metJ	1077093..1077410 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=771654 QQ972_RS05195 WP_000644911.1 1072570..1073595(-) (cytR) [Escherichia coli strain Q5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=771654 QQ972_RS05195 WP_000644911.1 1072570..1073595(-) (cytR) [Escherichia coli strain Q5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625