Detailed information NTG0077147

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BSG8_RS12775
• Genome accession: NZ_AP025224
• Coordinates: 2349061..2350188 (-)
• Length: 375 a.a.
• NCBI ID: WP_014480328.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto strain G8
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2344061..2355188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSG8_RS12750	-	2344108..2344320 (-)	213	Protein_2509	recombinase family protein	-
BSG8_RS12755 (BSG8_25290)	fumC	2344539..2345927 (-)	1389	WP_014480325.1	class II fumarate hydratase	-
BSG8_RS12760 (BSG8_25300)	-	2346094..2346984 (+)	891	WP_014480326.1	LysR family transcriptional regulator	-
BSG8_RS12765 (BSG8_25310)	-	2347926..2348321 (+)	396	WP_014480327.1	VOC family protein	-
BSG8_RS12775 (BSG8_25320)	rapC	2349061..2350188 (-)	1128	WP_014480328.1	Rap family tetratricopeptide repeat protein	Regulator
BSG8_RS12780	-	2350370..2352296 (+)	1927	Protein_2514	T7SS effector LXG polymorphic toxin	-
BSG8_RS12785 (BSG8_25350)	-	2352310..2352597 (+)	288	WP_014480331.1	hypothetical protein	-
BSG8_RS12790 (BSG8_25360)	-	2353000..2353440 (+)	441	WP_014480332.1	SMI1/KNR4 family protein	-
BSG8_RS12795 (BSG8_25370)	-	2353539..2353991 (+)	453	WP_014480333.1	SMI1/KNR4 family protein	-
BSG8_RS12800 (BSG8_25380)	cdiI	2354088..2354447 (+)	360	WP_014480334.1	ribonuclease toxin immunity protein CdiI	-
BSG8_RS12805 (BSG8_25390)	-	2354552..2355031 (+)	480	WP_224588637.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44149.36 Da
• Isoelectric Point: 6.0289

>NTDB_id=77147 BSG8_RS12775 WP_014480328.1 2349061..2350188(-) (rapC) [Bacillus subtilis subsp. natto strain G8]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALKLSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=77147 BSG8_RS12775 WP_014480328.1 2349061..2350188(-) (rapC) [Bacillus subtilis subsp. natto strain G8]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCTTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACGACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAAAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397