Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | QQ984_RS09325 | Genome accession | NZ_CP127223 |
| Coordinates | 1800059..1800421 (+) | Length | 120 a.a. |
| NCBI ID | WP_003181796.1 | Uniprot ID | A0A6I1MJA4 |
| Organism | Bacillus licheniformis strain Jrh14-10 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1795059..1805421
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQ984_RS09295 (QQ984_09295) | flgD | 1795903..1796370 (+) | 468 | WP_003181782.1 | flagellar hook assembly protein FlgD | - |
| QQ984_RS09300 (QQ984_09300) | flgG | 1796398..1797189 (+) | 792 | WP_003181784.1 | flagellar basal body rod protein FlgG | - |
| QQ984_RS09305 (QQ984_09305) | - | 1797232..1797447 (+) | 216 | WP_003181786.1 | flagellar FlbD family protein | - |
| QQ984_RS09310 (QQ984_09310) | fliL | 1797444..1797875 (+) | 432 | WP_009328514.1 | flagellar basal body-associated protein FliL | - |
| QQ984_RS09315 (QQ984_09315) | fliM | 1797911..1798909 (+) | 999 | WP_003181789.1 | flagellar motor switch protein FliM | - |
| QQ984_RS09320 (QQ984_09320) | fliY | 1798899..1800032 (+) | 1134 | WP_003181794.1 | flagellar motor switch phosphatase FliY | - |
| QQ984_RS09325 (QQ984_09325) | pilH | 1800059..1800421 (+) | 363 | WP_003181796.1 | response regulator | Machinery gene |
| QQ984_RS09330 (QQ984_09330) | fliZ | 1800491..1801108 (+) | 618 | WP_229098720.1 | flagella biosynthesis regulatory protein FliZ | - |
| QQ984_RS09335 (QQ984_09335) | fliP | 1801101..1801766 (+) | 666 | WP_009328512.1 | flagellar type III secretion system pore protein FliP | - |
| QQ984_RS09340 (QQ984_09340) | fliQ | 1801782..1802051 (+) | 270 | WP_003181801.1 | flagellar biosynthesis protein FliQ | - |
| QQ984_RS09345 (QQ984_09345) | fliR | 1802059..1802835 (+) | 777 | WP_003181804.1 | flagellar biosynthetic protein FliR | - |
| QQ984_RS09350 (QQ984_09350) | flhB | 1802835..1803914 (+) | 1080 | WP_003181806.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13280.60 Da Isoelectric Point: 4.5762
>NTDB_id=771463 QQ984_RS09325 WP_003181796.1 1800059..1800421(+) (pilH) [Bacillus licheniformis strain Jrh14-10]
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=771463 QQ984_RS09325 WP_003181796.1 1800059..1800421(+) (pilH) [Bacillus licheniformis strain Jrh14-10]
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.136 |
98.333 |
0.375 |