Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QQ984_RS05670 Genome accession   NZ_CP127223
Coordinates   1109406..1110146 (+) Length   246 a.a.
NCBI ID   WP_009328947.1    Uniprot ID   Q65LS1
Organism   Bacillus licheniformis strain Jrh14-10     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1104406..1115146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QQ984_RS05635 (QQ984_05635) - 1104559..1104906 (+) 348 WP_003180252.1 YhaI family protein -
  QQ984_RS05640 (QQ984_05640) - 1104903..1105523 (-) 621 WP_003180254.1 HTH-type transcriptional regulator Hpr -
  QQ984_RS05645 (QQ984_05645) - 1105717..1106073 (-) 357 WP_003180256.1 YtxH domain-containing protein -
  QQ984_RS05650 (QQ984_05650) - 1106235..1106426 (+) 192 WP_003180258.1 hypothetical protein -
  QQ984_RS05655 (QQ984_05655) - 1106517..1107044 (-) 528 WP_003180260.1 tryptophan transporter -
  QQ984_RS05660 (QQ984_05660) serC 1107187..1108260 (-) 1074 WP_003180262.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  QQ984_RS05665 (QQ984_05665) - 1108459..1108878 (-) 420 WP_009328949.1 HIT family protein -
  QQ984_RS05670 (QQ984_05670) pptA 1109406..1110146 (+) 741 WP_009328947.1 ABC transporter ATP-binding protein Regulator
  QQ984_RS05675 (QQ984_05675) - 1110139..1111362 (+) 1224 WP_011197713.1 ABC transporter permease -
  QQ984_RS05680 (QQ984_05680) - 1111415..1112125 (+) 711 WP_011197714.1 EcsC family protein -
  QQ984_RS05685 (QQ984_05685) - 1112156..1113316 (-) 1161 WP_164504584.1 M20 family metallopeptidase -
  QQ984_RS05690 (QQ984_05690) - 1113458..1114834 (-) 1377 WP_023856561.1 membrane protein -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 28113.56 Da        Isoelectric Point: 4.9850

>NTDB_id=771429 QQ984_RS05670 WP_009328947.1 1109406..1110146(+) (pptA) [Bacillus licheniformis strain Jrh14-10]
MSLLTVKELTGGYTRNPVLRDVSFAIEREQIVGLIGLNGAGKSTTIRHIIGLMEPHKGSVELNGKTFMDDPESYRSQFTF
IPETPILYEELTLKEHLELTAMAYGLSKETFEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLVEPDLYIIDE
PFLGLDPLAINALLERMNEAKKNGSAVLMSTHILATAERYCDSFIILHNGEVRAKGTLEELREQFSMEEASLDDLYLELT
KEESYE

Nucleotide


Download         Length: 741 bp        

>NTDB_id=771429 QQ984_RS05670 WP_009328947.1 1109406..1110146(+) (pptA) [Bacillus licheniformis strain Jrh14-10]
ATGTCACTACTGACTGTTAAAGAGTTAACTGGAGGGTATACAAGAAACCCGGTGCTGCGCGATGTTTCATTTGCGATTGA
ACGGGAGCAGATCGTCGGGCTGATCGGTTTGAACGGAGCGGGGAAAAGCACGACGATCCGGCATATCATCGGCTTAATGG
AACCGCACAAAGGATCTGTTGAATTGAACGGCAAAACGTTCATGGACGATCCGGAAAGCTACCGTTCCCAATTTACGTTT
ATTCCGGAAACGCCGATTTTATATGAAGAGCTGACATTGAAGGAGCATTTGGAGCTGACTGCGATGGCGTACGGGCTTTC
GAAGGAAACGTTCGAGAAAAGGCTGCCGCCGCTTTTGAAGGAATTCAGAATGGAGAAGCGTCTGAAATGGTTCCCGGCCC
ATTTTTCAAAAGGAATGAAGCAGAAGGTTATGATCATGTGCGCTTTCCTTGTCGAACCTGACCTGTACATTATAGACGAA
CCGTTTCTCGGTCTTGATCCGCTGGCGATCAATGCCCTTCTCGAGCGGATGAATGAAGCGAAGAAAAACGGCTCGGCCGT
TTTGATGTCGACGCATATTTTGGCAACGGCAGAGCGATATTGCGACTCCTTCATCATTCTCCATAACGGCGAAGTGCGGG
CGAAAGGAACGCTTGAAGAGCTCAGAGAACAGTTTTCGATGGAAGAAGCGAGCCTCGATGACCTGTATCTTGAACTGACG
AAGGAAGAGAGCTATGAATAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65LS1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.676

97.967

0.565
  pptA Streptococcus thermophilus LMD-9

56.432

97.967

0.553