Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   QOM21_RS15675 Genome accession   NZ_CP127172
Coordinates   3581093..3582826 (-) Length   577 a.a.
NCBI ID   WP_407550654.1    Uniprot ID   -
Organism   Streptomyces sp. Pv4-95 voucher LV 740     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3576093..3587826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOM21_RS15660 (QOM21_15670) - 3577110..3577949 (-) 840 WP_407550648.1 response regulator transcription factor -
  QOM21_RS15665 (QOM21_15675) - 3578196..3579041 (+) 846 WP_407550650.1 alpha/beta hydrolase family protein -
  QOM21_RS15670 (QOM21_15680) rcrQ 3579093..3581096 (-) 2004 WP_407550652.1 ABC transporter ATP-binding protein Regulator
  QOM21_RS15675 (QOM21_15685) rcrP 3581093..3582826 (-) 1734 WP_407550654.1 ABC transporter ATP-binding protein Regulator
  QOM21_RS15680 (QOM21_15690) - 3583036..3583281 (+) 246 WP_407555691.1 MoaD/ThiS family protein -
  QOM21_RS15685 (QOM21_15695) - 3583292..3584668 (+) 1377 WP_407550656.1 hypothetical protein -
  QOM21_RS15690 (QOM21_15700) - 3584849..3585550 (+) 702 WP_407550658.1 DUF2993 domain-containing protein -
  QOM21_RS15695 - 3585829..3585936 (+) 108 WP_371873992.1 Ms5788A family Cys-rich leader peptide -
  QOM21_RS15700 (QOM21_15705) - 3586093..3586932 (+) 840 WP_407550660.1 sulfurtransferase -
  QOM21_RS15705 (QOM21_15710) - 3586971..3587258 (+) 288 WP_398559687.1 DUF1416 domain-containing protein -
  QOM21_RS15710 (QOM21_15715) - 3587407..3587691 (+) 285 WP_407550662.1 DUF3099 domain-containing protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62913.30 Da        Isoelectric Point: 6.5180

>NTDB_id=771369 QOM21_RS15675 WP_407550654.1 3581093..3582826(-) (rcrP) [Streptomyces sp. Pv4-95 voucher LV 740]
MLVRLAKAHLRPHRRSISLIVVLQLIQTLATLYLPTLNADIIDNGVVKGDTGYILRLGGAMTAVTLLQIVCAIGAVYFGA
RTAMALGRDIRAAVFDRVQSFSAREMGTFGAPSLITRTTNDVQQVQMLVLMTFTMMVSAPIMCVGGVVMALNQDVPLSGL
LLVIVPVLGILVSLIVRRMRPLFRGVQERIDTVNRVLREQITGIRVIRAFVRDRYERERFGAANTDLYDVSLRAGRLMSM
MFPLVMLIVNLSSVAVVWFGGLRIDSGDMQVGALTAFLSYLMYILMSIMMATFMVMMLPRAEVCAERIQEVLATDSSVIP
AEHPVTELRRHGELELRGVEFRFPGAEEPVLKDISLVARPGETTAVIGSTGSGKSTLLGLVPRLFDATGGTVLVDGEDVR
TLDQETLADAIGLVPQKPYLFSGTVATNLRYGKPDATDEELWHALETAQARDFVERMEGGLAASIAQGGSNVSGGQRQRL
AIARALVRRPEIYLFDDSFSALDYATDAALRAALSRETGRATVVIVAQRVSTIRGADRIVVLDEGRVVGTGTHAELMADN
ETYREIVLSQLTEQEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=771369 QOM21_RS15675 WP_407550654.1 3581093..3582826(-) (rcrP) [Streptomyces sp. Pv4-95 voucher LV 740]
GTGTTGGTCCGACTCGCGAAGGCCCATCTGCGGCCGCATAGGCGCTCCATATCCCTGATCGTGGTGCTCCAGCTCATCCA
GACGCTGGCCACCCTCTACCTGCCCACCCTCAACGCCGACATCATCGACAACGGTGTCGTCAAGGGGGACACGGGCTACA
TCCTCCGTCTCGGCGGCGCGATGACCGCCGTCACGCTGCTCCAGATCGTCTGCGCGATCGGCGCCGTCTACTTCGGCGCC
CGGACCGCCATGGCCCTCGGCCGTGACATCCGCGCCGCCGTCTTCGACCGGGTGCAGTCGTTCTCCGCACGGGAGATGGG
CACCTTCGGCGCACCGTCGCTGATCACCCGCACCACCAATGACGTCCAGCAGGTGCAGATGCTGGTGCTGATGACCTTCA
CGATGATGGTCTCCGCGCCGATCATGTGCGTCGGCGGTGTGGTCATGGCGCTCAACCAGGACGTGCCGCTGTCGGGCCTG
CTCCTCGTCATCGTCCCGGTCCTCGGGATCCTCGTCTCACTGATCGTGCGCCGGATGCGCCCGCTCTTCCGCGGGGTGCA
GGAGCGCATCGACACCGTCAACCGGGTGCTGCGGGAGCAGATCACGGGCATCCGCGTCATCCGCGCCTTCGTCCGCGACC
GGTACGAACGCGAGCGGTTCGGCGCCGCCAACACCGACCTCTACGACGTCTCGCTGCGCGCGGGCCGGCTGATGTCGATG
ATGTTCCCGCTGGTCATGCTCATCGTGAACCTCTCCAGCGTGGCGGTGGTCTGGTTCGGCGGACTCCGCATCGACAGCGG
CGACATGCAGGTCGGCGCGCTCACCGCCTTCCTCAGCTACCTGATGTACATCCTCATGTCGATCATGATGGCGACGTTCA
TGGTGATGATGCTGCCGCGCGCCGAGGTCTGCGCCGAACGCATCCAGGAGGTGCTGGCGACCGACAGCAGCGTCATTCCG
GCGGAGCACCCCGTCACCGAACTGCGCCGGCACGGCGAACTGGAGCTGCGCGGCGTCGAGTTCCGCTTCCCGGGCGCCGA
GGAGCCGGTGCTCAAGGACATCTCGCTGGTCGCCAGGCCCGGCGAGACCACCGCCGTCATCGGCTCGACCGGCAGCGGCA
AGTCGACCCTCCTCGGCCTCGTCCCACGGCTGTTCGACGCGACCGGCGGCACGGTCCTGGTGGACGGCGAGGACGTCCGC
ACCCTCGACCAGGAGACCCTCGCCGACGCGATCGGCCTGGTCCCGCAGAAGCCGTACCTCTTCTCCGGGACCGTCGCGAC
GAACCTGCGCTACGGCAAGCCGGACGCCACCGACGAGGAGCTGTGGCACGCGCTGGAGACCGCGCAGGCGCGCGACTTCG
TCGAGCGGATGGAGGGCGGCCTCGCCGCCTCGATCGCGCAGGGCGGCAGCAACGTCTCCGGAGGCCAGCGGCAGCGGCTG
GCGATCGCGCGGGCGCTGGTGCGCCGGCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTGGACTACGCGACGGA
CGCCGCGCTGCGGGCCGCGCTCTCCCGCGAGACCGGCCGGGCGACGGTGGTGATCGTCGCGCAGCGCGTCTCGACGATCC
GCGGTGCCGACCGGATCGTCGTCCTGGACGAGGGCCGGGTCGTCGGCACCGGCACACACGCCGAGCTGATGGCGGACAAC
GAGACCTATCGGGAGATCGTGCTCTCCCAGCTCACCGAGCAGGAGGCGGCGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(19-287)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.437

95.147

0.385