Detailed information NTG0771057

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PCP38_RS06990
• Genome accession: NZ_CP115275
• Coordinates: 1526520..1528793 (-)
• Length: 757 a.a.
• NCBI ID: WP_323790815.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain F014
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1521520..1533793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP38_RS06955 (PCP38_06955)	murB	1521910..1522929 (-)	1020	WP_003106928.1	UDP-N-acetylmuramate dehydrogenase	-
PCP38_RS06960 (PCP38_06960)	-	1522926..1523390 (-)	465	WP_004350898.1	low molecular weight protein-tyrosine-phosphatase	-
PCP38_RS06965 (PCP38_06965)	kdsB	1523390..1524154 (-)	765	WP_003091155.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PCP38_RS06970 (PCP38_06970)	-	1524154..1524339 (-)	186	WP_003091157.1	Trm112 family protein	-
PCP38_RS06975 (PCP38_06975)	lpxK	1524377..1525375 (-)	999	WP_003091159.1	tetraacyldisaccharide 4'-kinase	-
PCP38_RS06980 (PCP38_06980)	-	1525375..1525815 (-)	441	WP_003091161.1	ExbD/TolR family protein	-
PCP38_RS06985 (PCP38_06985)	exbB	1525812..1526447 (-)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
PCP38_RS06990 (PCP38_06990)	comA	1526520..1528793 (-)	2274	WP_323790815.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PCP38_RS06995 (PCP38_06995)	-	1528863..1529396 (+)	534	WP_003091165.1	DUF2062 domain-containing protein	-
PCP38_RS07000 (PCP38_07000)	-	1529484..1530728 (-)	1245	WP_003113987.1	lipoprotein-releasing ABC transporter permease subunit	-
PCP38_RS07005 (PCP38_07005)	lolD	1530798..1531481 (-)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PCP38_RS07010 (PCP38_07010)	-	1531474..1532724 (-)	1251	WP_003091170.1	lipoprotein-releasing ABC transporter permease subunit	-
PCP38_RS07015 (PCP38_07015)	-	1532827..1533426 (+)	600	WP_003105196.1	PilZ domain-containing protein	-
PCP38_RS07020 (PCP38_07020)	-	1533453..1533761 (+)	309	WP_021204767.1	hypothetical protein	-

Sequence

Protein

• Length: 757 a.a.
• Molecular weight: 80978.40 Da
• Isoelectric Point: 11.7285

>NTDB_id=771057 PCP38_RS06990 WP_323790815.1 1526520..1528793(-) (comA) [Pseudomonas aeruginosa strain F014]
MTPCDMSGSGGHATGMGGTVHAPGIASPRRGAAGPALPGGIAVGRLAAGHGRRRTVAAVRPAVLAGVVPARVRLGLRLGA
SRPGRTPGRRAGWSHGRVVDLPASGEGVTRFRLEEVRAARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAA
GFDYEAWLLAQRVGAVGTVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVH
LMVISGSHISLLAGMLYGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFRHL
GLLTPLLATLVLVLLVEPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGA
PANLLAVPWIELLVVPPALAGSLLLWVPGLGEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAAWSVALGMLGALCWL
APAGLPLRALGAALLLPALLPSSPPVEWGRAEVRVLDVGQGLAVLVRTREHVLLYDSGARQGAFDMGERVVVPVLRSLDL
RRLDGLLLSHADNDHAGGAPTVASRFPPVWLVSGEPARLPSPLFADSCDERSWSWDGVVFEQWAWAQAGDSNDRSCVLRV
EADGEVLLLTGDISRAAEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPRHVLVSRGWRNAFGHPHGEVMERYAR
VAAQVHDTARDGALTFLLGSRGGARRERDSAHFWREK

Nucleotide

• Length: 2274 bp

>NTDB_id=771057 PCP38_RS06990 WP_323790815.1 1526520..1528793(-) (comA) [Pseudomonas aeruginosa strain F014]
ATGACCCCATGTGACATGTCGGGGAGCGGAGGGCACGCCACGGGGATGGGAGGAACCGTTCATGCGCCTGGGATTGCCAG
CCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGCGGAATTGCCGTCGGTCGGCTGGCTGCTGGGCATGGCCGCCGCC
GGACTGTTGCTGCTGTTCGGCCGGCTGTACTGGCTGGGGTTGTTCCTGCTCGGGTTCGCCTGGGCCTGCGGCTCGGCGCA
AGTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGATGGTCGCACGGGCGTGTGGTCGATCTGCCGGCGAGCGGCGAGGG
CGTCACGCGCTTCCGGCTGGAGGAGGTCCGCGCTGCGCGGGGCGTGCTTCTTCCCGAGCGTCTGCGCCTGAGCTGGCGCG
GCGCGCCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCCTGAAACGCCCCCGCGGCCTGGTGAACGCGGCG
GGTTTCGACTACGAGGCCTGGTTGTTGGCGCAGCGGGTCGGTGCTGTGGGCACGGTGAAGGCGGGCCAGCGCCTGCAGCC
GGCCAGCGGCCTGGATGCCTGGCGCGATGCCTGGCGCCAGCGCCTGCTGGCGGTCGACGCACAGGGGCGCGGCGCCGCCC
TGGCGGCGCTGGTGCTGGGGGATGGCTCGGGGTTGAGCGCGGCCGAGTGGCGAATGTTCCAGGACACCGGCACCGTGCAT
CTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTCTATGGCCTGGTGGCGGCCTTGCATCGCCTGGG
CTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGGTTTGCTTGGTGCCTGGAGCTACGGGTTGATGG
CGGGTTTCGAGGTCCCGGTGCGGCGCGCCTGCCTGATGGTCAGCCTGGCGCTGGTCTGGCGCCTGCGTTTCCGCCACCTG
GGCTTGCTGACCCCGCTGCTGGCAACGCTGGTGCTGGTCTTGCTGGTCGAGCCGCTGGCCAGCCTGCAGGCGGGGTTCTG
GCTGTCGTTCCTGGCGGTTGCCCTGCTGCTCTGGCTGTTCGCCGGGCGCCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGG
GGCGGGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGGCGCTGGGCCTGCCGTTGAGCCTGAGCGGAGCG
CCGGCCAACCTGCTGGCGGTGCCTTGGATCGAACTGCTGGTAGTGCCCCCGGCCCTGGCGGGGAGCCTGCTGCTGTGGGT
GCCCGGGCTGGGCGAGGGGCTGCTTCGCGCCGCTGGCGTTTCGCTGGACCTGCTGTTTCGTGCGCTTGGCCTGCTGGCGG
GCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAGCGCTGGGCATGCTCGGCGCGCTCTGCTGGCTG
GCGCCGGCTGGCTTGCCGTTGCGTGCCCTCGGTGCCGCGTTGCTACTGCCGGCATTGTTGCCGTCATCGCCGCCTGTCGA
ATGGGGGCGGGCGGAAGTGCGGGTGCTGGACGTCGGCCAGGGGCTGGCCGTGCTGGTGCGTACCCGAGAGCATGTCTTGC
TCTATGACAGCGGTGCGCGGCAGGGGGCGTTCGACATGGGCGAGCGGGTGGTGGTGCCGGTGCTGCGCAGCCTGGACCTG
CGGCGCCTGGACGGCCTGTTGCTGAGCCATGCCGACAACGACCATGCAGGCGGTGCTCCTACGGTCGCTTCCCGATTCCC
GCCGGTTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTTGTTCGCGGACAGCTGCGACGAGCGGAGCTGGT
CCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCACAGGCCGGCGACAGCAACGACCGCTCCTGTGTGCTGAGGGTC
GAGGCCGATGGCGAAGTCCTGCTGCTGACCGGGGACATCTCGCGTGCGGCCGAGCATGCCTGGCTGGCGCGACAGGCCGA
TCCCCGGGTCGACTGGTTGCTGGCGCCGCATCATGGCAGCCGCAGTTCCTCCGGAGTCGCCTTCGTGTTGCGTACGCGGC
CTCGCCATGTGCTGGTCTCGCGAGGTTGGCGCAACGCCTTCGGCCATCCCCATGGCGAAGTGATGGAGCGTTACGCGAGG
GTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTTCTCCTCGGAAGCCGTGGCGGCGCACGCCGGGA
GCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (517-682)

• Competence protein (Competence) (217-480)

• Domain of unknown function (DUF4131) (DUF4131) (94-184)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.445	88.375	0.517