Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   BSG8_RS02840 Genome accession   NZ_AP025224
Coordinates   528332..528973 (+) Length   213 a.a.
NCBI ID   WP_014478974.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto strain G8     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 523332..533973
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSG8_RS02810 (BSG8_05500) ydfE 524526..525149 (-) 624 WP_014478968.1 flavin reductase family protein -
  BSG8_RS02815 (BSG8_05510) ydfF 525239..525919 (+) 681 WP_014478969.1 winged helix-turn-helix domain-containing protein -
  BSG8_RS02820 (BSG8_05520) ydfG 526000..526443 (-) 444 WP_014478970.1 carboxymuconolactone decarboxylase family protein -
  BSG8_RS02825 (BSG8_05530) - 526529..526708 (-) 180 WP_010886421.1 hypothetical protein -
  BSG8_RS02830 - 526705..526848 (-) 144 WP_014478971.1 hypothetical protein -
  BSG8_RS02835 (BSG8_05540) ydfH 527116..528339 (+) 1224 WP_033881070.1 two-component system sensor histidine kinase YdfH -
  BSG8_RS02840 (BSG8_05550) vraR 528332..528973 (+) 642 WP_014478974.1 two-component system response regulator YdfI Regulator
  BSG8_RS02845 (BSG8_05560) ydfJ 529089..531263 (+) 2175 WP_033881069.1 MMPL family transporter -
  BSG8_RS02850 (BSG8_05570) cesA 531674..532576 (-) 903 WP_014478976.1 carboxylesterase -
  BSG8_RS02855 (BSG8_05580) ydfK 532779..533468 (-) 690 WP_019712443.1 DUF554 domain-containing protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24004.93 Da        Isoelectric Point: 5.1938

>NTDB_id=77069 BSG8_RS02840 WP_014478974.1 528332..528973(+) (vraR) [Bacillus subtilis subsp. natto strain G8]
MNKVLIVDDHLVVREGLKLLIETNDQYTIIGEAENGKVAVRLADELEPDIILMDLYMPEMSGLEAIKQIKEKHDTPIIIL
TTYNEDHLMIEGIELGAKGYLLKDTSSETLFHTMDAAIRGNVLLQPDILKRLQEIQFERMKKQRSETQLTEKEVIVLKAI
AKGLKSKAIAFDLDVSERTVKSRLTSIYNKLGANSRTEAVTIAMQKGILTIDN

Nucleotide


Download         Length: 642 bp        

>NTDB_id=77069 BSG8_RS02840 WP_014478974.1 528332..528973(+) (vraR) [Bacillus subtilis subsp. natto strain G8]
ATGAATAAGGTTTTAATCGTTGATGACCATCTTGTCGTGAGGGAAGGTCTGAAGCTTTTAATTGAAACGAATGATCAATA
CACCATTATAGGAGAGGCGGAAAATGGAAAAGTCGCAGTCCGTCTTGCAGATGAATTAGAACCGGATATCATTCTGATGG
ATTTGTATATGCCGGAGATGAGCGGGTTAGAGGCCATTAAACAAATAAAAGAAAAACACGATACCCCCATCATTATTTTG
ACTACATATAATGAAGATCACTTAATGATCGAAGGGATTGAATTAGGAGCGAAAGGATATCTGTTAAAGGATACGAGTTC
AGAAACCCTTTTTCACACAATGGATGCAGCGATCAGAGGAAATGTGCTGTTGCAGCCTGATATCCTCAAACGTCTGCAAG
AAATCCAATTTGAGCGGATGAAAAAGCAGCGCAGTGAGACGCAGCTGACGGAAAAGGAAGTCATTGTTCTAAAAGCAATT
GCTAAAGGTCTTAAAAGCAAAGCGATTGCCTTTGATTTGGACGTCTCTGAGCGAACAGTAAAGTCCAGATTAACGTCCAT
TTACAATAAATTAGGCGCGAATTCAAGAACTGAGGCAGTAACGATTGCCATGCAAAAAGGTATTCTGACAATAGACAACT
AA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(148-203)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

37.264

99.531

0.371

Multiple sequence alignment